TnCentral: a Prokaryotic Transposable Element Database

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TnCentral nucleotide blast

Blast program:

blastn

blastp

Enter a sequence here:

Paste nucleotide Example Clear

Or, upload file (Fasta format):

N° of hits to display

Expect threshold

Word size

Composition-based?

Yes

No

Choose filter

Low complexity

Mask for lookup table only

Mask for lower case letters

Match/Mismatch scores

Matrix

Gap costs

Other Sequence Search Services: Isfinder CARD Toxin/Antitoxin NCBI