Mobile element type:
Transposon
Name:
TnSba14
Synonyms:
Tn7190
Accession:
TnSba14-NC_009052
Family:
Tn3
Group:
Tn21
First isolate:
Yes
Partial:
ND
Evidence of transposition:
ND
Host Organism:
Shewanella baltica OS155
Date of Isolation:
2007
Country:
| Name | Coordinates | Direction | Length | Sequence |
|---|---|---|---|---|
| IRL | 1-38 | + | 38 | GGGGTCCGCT TGGAAAACGG AAAATATCCC ACGCTAAG |
| IRR | 3778-3815 | - | 38 | GGGGTCCGCT TGGAAAACGG AAAATATCCC ACGCTAAG |
ORF Summary
| Name | Associated TE | Coordinates | Orientation | Class | Subclass |
|---|---|---|---|---|---|
| tnpA | TnSba14 | 798-3782 | + | Transposase |
ORF Details
| Gene Name | Protein Name | Associated TE | Gene Length | Coordinates | Strand | tnpA | TnpA | TnSba14 | 994 | 798-3782 | + |
|---|
| Class: | Transposase | ||||||||||
| Transposase Chemistry: | DDE | ||||||||||
| Protein Sequence: | MPRRQILSSE EQKRLLVIPD DEIILTRMCF LNERDIALIN KHRRPANRLG FAVLLCYLRG SGFIPDKNTS PHCGVVSRVA SRLKLQPDLW HEYASREQTR WEHLTELYRY LKLSPFSRTL QKDCIRHLHP YAMRTDKGFM LAEEMLSWLH NNNVIFPSVD VIERTIAEIV TLSDRAVFSA LTAQLENHHK SALDSLLISE SDQPSRLAWL LQPSGKINGK NVLQHIDRLN SITALGLPDG IALSVHQNRL LKLAREGRKM SSRDLAKFTD VRRYATMICI ITEARATLTD EVIDLHERIL GSLFSRAKRT QSERLQQTGK LIQSKLKQYV TVGQALLNAR ESGEDPWTAI EDVLPWQEFI NSVEETRVLS RKGNFDPLHL ITEKYSTLRK YAPRMLSALQ FTAAPAAQML SDALDTITEM YRKQLRQVPP AAPTGFIPES WRKLVLTPSG IDRKYYEFCV LNELKGALRS GDIWVKGSRR YRNFDDYLIT AAEFEKFRHN DQLQLAVQTD CRAYLQARMT LLASRLEEVN AMALAGDLPD VDISDKGVKI TPLENSVPSG VSPFADLVYG MLPHPKITEI LEEVDNWTGF TRHFTHLKNN NVRPKDGRPL LTTILADGIN LGLTKMAESC PGATKSTLEG IQAWYIRDET YSAALVELVN AQKARPLAAF WGDGTTSSSD GQNFRVGSHG RYAGQVNLKY GQEPGVQIYT HISDQYSPYY AKVITRVRDS THVLDGLLYH ESDLEITEHY TDTAGFTEHV FALMHLLGFT FAPRIRDLHD KRLFIQGNNW DYPGLQSVIS TTRLNLKDIE AHWDEVLRLA TSIKQGTVTA SLMMKKLASY PKQNGLAKAL REIGRIERTL FMLDWFRDPG LRQRVQAGLN KGEARNALAR AVFMHRLGEI RDRGLENQSY RASGLTLLTA AITLWNTVYI ERAIESLKRK GVPINEQLVA HLSPLGWEHI NLSGDYVWRH NVKLGSGKYR PLRTVNTELY KKQS |
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