Mobile element type:
Transposon
Name:
TnAcsp1
Synonyms:
Tn7133
Accession:
TnAcsp1-MF399199
Family:
Tn3
Group:
Tn21
First isolate:
Yes
Partial:
ND
Evidence of transposition:
ND
Host Organism:
Acinetobacter baumannii D46
Date of Isolation:
2017
Country:
Australia
Molecular Source:
plasmid pD46-4
| Name | Coordinates | Direction | Length | Sequence |
|---|---|---|---|---|
| IRL | 1-46 | + | 46 | GGGGTCGTCT CAGGAAACGG AAAATATAGC ACGCTAAGGA TTTTCA |
| IRR | 3691-3736 | - | 46 | GGGGTCGTCT CAGGAAACGG AAAATATAGC ACGCTAAGGT TTTTCA |
ORF Summary
| Name | Associated TE | Coordinates | Orientation | Class | Subclass |
|---|---|---|---|---|---|
| tnpR | TnAcsp1 | 34-648 | - | Accessory Gene | Resolvase |
| tnpA | TnAcsp1 | 737-3703 | + | Transposase |
ORF Details
| Gene Name | Protein Name | Associated TE | Gene Length | Coordinates | Strand | tnpR | TnpR | TnAcsp1 | 204 | 34-648 | - |
|---|
| Class: | Accessory Gene | ||||||||||
| Subclass: | Resolvase | ||||||||||
| Sequence Family: | Serine Site-Specific Recombinase | ||||||||||
| Transposase Chemistry: | Serine | ||||||||||
| Protein Sequence: | VQLGQNAAIY CRVSTNDQSC ERQEYDLRAY ANRCGYDVVG VWKETASGSK DERLQRKYLM TMAQSREIDA ILVTELTRWG RSTVDLVQSL QDLGHFGVSL VAQTGLQFDL STSQGKLMAS VMSALAEFEG DLLRERVRSG VAAAQARGVV FGRRPGQRTK SDRLAPKVLE LVSAGHSYRQ VGRLVNLSKN TVLDIVKRSR SENP |
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| Gene Name | Protein Name | Associated TE | Gene Length | Coordinates | Strand | tnpA | TnpA | TnAcsp1 | 988 | 737-3703 | + |
|---|
| Class: | Transposase | ||||||||||
| Transposase Chemistry: | DDE | ||||||||||
| Protein Sequence: | MPRHSILSST ELGSLFEIPD DRAFMLQHYT LSDSDKSIVH QHRGASNKLG FAIQLCYMRY PGVILGINDE PFKPLLFMMA AQLSISVDCW NDYGQREQTR REHIAELKKV FGFKLFTLSD YRQSVNMMVD LSLQTDKGLI LATTLVENLR QKSVLLPAIN AIDSICAEAI TSANRIIYTA LTSSLSETHR QNIDALLNRK EGSKLTILGW LRQSPAKPNS KYMLEHIERL KCLQAIDLPE DIGKHVHQNR LLKIAREGGQ MTPADLARFE SQRRYATLVA IVVESMATIT DEIIDLHDRI IGKLFAIAKN KHQQQFQSSG KAINDKVRLY GLIGKALLDA KQNGSDPFAA IETVISWDAF AASITEAEKL AQPEDFDFLP RIGESYATLR RYAPELLAIL KLRAAPAAKD MLAAVELLRS MNVDNTRKIP SNAPIAFIKK RWARLVFTDD GIDRRYYEIC VLSELKNSLR AGDLWVQGSR QFKDFDEYLV TADKFNQLKQ SNELPLTITT DCDLYLQSRL SLLEQKLAII NRMAATNDLP DAMINQSGLK ITPLDAVAPD TAQTLIDQTA MLLPHIKITE LLMEVDEWTG FTRHFTHLKT DDTAKDKALL LTTILADAIN LGLTKMAESC PGTTYAKLSW LQAWHIRDET YSTALAELVN AQLKQPFAEN WGDGTTSSSD GQRFRAGGRA ESTGHINPKY GAEPGRLFYT HISDQYAPFS SKLINVGVRD STYVLDGLLY HESDLRIEEH YTDTAGFTDH VFALMHMLGF RFAPRIRDLG DTKLYIPKSD IDYAALKPMI GGTLNIKQIR THWDDILRLA ASIKQGTVTA SLMLRKLGSY PRQNGLALAL RELGRIERTL FILDWLQSVE LRRRVQAGLN KGEARNALAR AVFFYRLGEI RDRSFEQQRY RASGLNLVTA AIVLWNTVYL ERATNALRGH GRTVDDTLLQ YLSPLGWEHI NLTGDYLWRS KAKIGGGKFR PLRAIEKP |
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