Mobile element type:
Insertion sequence
Name:
ISXac1
Synonyms:
Accession:
ISXac1-NC_003919
Family:
IS4
Group:
IS10
First isolate:
Yes
Partial:
ND
Evidence of transposition:
ND
| Name | Coordinates | Direction | Length | Sequence |
|---|---|---|---|---|
| IRL | 1-50 | + | 50 | TGAGGTTTCC CCACATTTCT TCCTGCGAGA TCAAGCGCTT GGTGGGCCAG |
| IRR | 1301-1350 | - | 50 | CTTAGGTATC CCCACGTTTT TAAAGCACCA GCGTCATCTG CTCACGCACT |
ORF Summary
| Name | Associated TE | Coordinates | Orientation | Class | Subclass |
|---|---|---|---|---|---|
| tnp | ISXac1 | 117-1331 | + | Transposase |
ORF Details
| Gene Name | Protein Name | Associated TE | Gene Length | Coordinates | Strand | tnp | Tnp | ISXac1 | 404 | 117-1331 | + |
|---|
| Class: | Transposase | ||||||||||
| Function: | transposition | ||||||||||
| Transposase Chemistry: | DDE | ||||||||||
| Protein Sequence: | MRASEVLQKC LSNSLSGMHA LRQRTLLGAV EALVHGGRLT LIDIARAWPG ATRVRAPLKA CDRLLCNRTL QAERSMIERD MAHWLLRGDQ PVIVIDWSDL KPDKSWCLLR AAVPIGGRTL TLLDMVVAGK QQGSPGAEKR FLQQLRRMIP DDVRPILVTD AGFRTPWFRA VSAMGWDWVG RLRGRTQVKP QDVPDDAAQW IDSRRLHALA SNRACELPPM QANRSDPLDC RLVLYAKTRL GRQQRNRRSP AKVSRASSSL KAAAREREPW LIVASPQLQA PSAKHLVNLY ARRMQIELAF RDLKSHRYGQ AMEDSLTRRG ERLQILLLLN TLATFASWLA GLGCEATGIA QWLSPRSSTR KLYSTLRVGR QALARRWPME PVSRWLERLR TLPEAVREQM TLVL |
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