Mobile element type:
Insertion sequence
Name:
ISKpn7
Synonyms:
Accession:
ISKpn7-KT378596
Family:
IS21
Group:
First isolate:
ND
Partial:
ND
Evidence of transposition:
ND
| Name | Coordinates | Direction | Length | Sequence |
|---|---|---|---|---|
| IRL | 1-29 | + | 29 | TGTTAGCAGC AGTGTAAAAC TGACCCACC |
| IRR | 1928-1956 | - | 29 | TGTCAACACC AACTGAAAAC TGACCCACT |
ORF Summary
| Name | Associated TE | Coordinates | Orientation | Class | Subclass |
|---|---|---|---|---|---|
| istA | ISKpn7 | 87-1112 | + | Transposase | |
| istB | ISKpn7 | 1109-1888 | + | Accessory Gene | ATPase Transposition Helper |
ORF Details
| Gene Name | Protein Name | Associated TE | Gene Length | Coordinates | Strand | istA | IstA | ISKpn7 | 341 | 87-1112 | + |
|---|
| Class: | Transposase | ||||||||||
| Function: | Transposase | ||||||||||
| Transposase Chemistry: | DDE | ||||||||||
| Protein Sequence: | MLTQEQTVEI RVLARQGHSI RHIARTLGVS RNTVRRYLRD PSVARYQPRE PRPTKLGPFE SYLRQRVEQA HPIWLPATVL NREIRAQGYG GGLSLLRAFL ATLKPARREA GPAVRFETEP GRQLQADFVV LRRARSPMSA FVATLGYSRM TFVTFVPDES FESVRDSLLL AFDYLGGVPR EVLFDNMKTV VLERDAYGDG KHRFHPGLLQ LADDLGFRIR LCRPYRAQTK GKVERFNRYF RESFYNPLLT RMKGTGLLLD CAAANRRVRD WLADEANVRV HATLNERPID RWRQEREHLQ PLPSRVRRDE APLLDNSLRP VPLESLQHPL SVYDAIGEAC R |
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| Gene Name | Protein Name | Associated TE | Gene Length | Coordinates | Strand | istB | IstB | ISKpn7 | 259 | 1109-1888 | + |
|---|
| Class: | Accessory Gene | ||||||||||
| Subclass: | ATPase Transposition Helper | ||||||||||
| Comment: | ATPase | ||||||||||
| Protein Sequence: | MNLQHERIDA LCQQLKLERV ATHYPVLAQQ AVREDFSFTD FLEHLLRHEA GCRQQRSREL LTRMACFPGI KTLEDYDFSF NPGVPKALVQ ELGSLAFVER AENVVLIGPS GIGKTHLAIA LGYKAAQAGV KTRFITAADL MLQLSTAQRQ GRLKEYFNRA ILGPRLLVID EIGYLPFGRE EANLFFQVVA KRYEKGAMIL TSNLPFSQWA DAFAGDTTLT AAMLDRLLHH AHILTLSGES YRLKDKRKAG VVRKNSKPE |
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