Mobile element type:
Insertion sequence
Name:
IS903
Synonyms:
IS903L, IS903R, Tn55, Tn601, IS602, Tn60
Accession:
IS903-V00359.1
Family:
IS5
Group:
IS903
First isolate:
ND
Partial:
ND
Evidence of transposition:
Yes
Host Organism:
Escherichia coli
Date of Isolation:
Country:
Molecular Source:
plasmid R6-5
| Name | Coordinates | Direction | Length | Sequence |
|---|---|---|---|---|
| IRL | 1-18 | + | 18 | GGCTTTGTTG AATAAATC |
| IRR | 1040-1057 | - | 18 | GGCTTTGTTG AATAAATC |
ORF Summary
| Name | Associated TE | Coordinates | Orientation | Class | Subclass |
|---|---|---|---|---|---|
| tnpA | IS903 | 78-1001 | + | Transposase | None |
ORF Details
| Gene Name | Protein Name | Associated TE | Gene Length | Coordinates | Strand | tnpA | TnpA | IS903 | 307 | 78-1001 | + |
|---|
| Class: | Transposase | ||||||||||
| Function: | GO molecular function: DNA binding, transposase activity. | ||||||||||
| Transposase Chemistry: | DDE | ||||||||||
| Protein Sequence: | MAKQKFKITN WSTYNKALIN RGSLTFWLDD GAIQAWYESA TPSSRGRPQR YSDLAITTVL VIKRVFRLTL RAAQGFIDSI FTLMNVPLRC PDYSCVSRRA KSVNISFKTF TRGEIAHLVI DSTGLKVFGE GEWKVKKHGQ ERRRIWRKLH LAVDSKTHEI ICADLSLNNV TDSEAFPGLI RQTHRKIRAA SADGAYDTRL CHDELRRKKI SALIPPRKGA GYWPGEYADR NRAVANQRMT GSNARWKWTT DYNRRSIAET AMYRVKQLFG GSLTLRDYDG QVAEAMALVR ALNKMTKAGM PESVRIA |
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1. Oka A, Sugisaki H, Takanami M.
Nucleotide sequence of the kanamycin resistance transposon Tn903.. J Mol Biol. 1981 Apr 5;147(2):217-26. doi: 10.1016/0022-2836(81)90438-1. PubMed ID:
6270337
.