Mobile element type:
Insertion sequence
Name:
IS10L
Synonyms:
Accession:
IS10L-AF162223
Family:
IS4
Group:
IS10
First isolate:
ND
Partial:
ND
Evidence of transposition:
ND
Host Organism:
Shigella flexneri
Date of Isolation:
Country:
| Name | Coordinates | Direction | Length | Sequence |
|---|---|---|---|---|
| IRL | 1-17 | + | 17 | CTGATGAATC CCCTAAT |
| IRR | 1308-1329 | - | 22 | CTGAGAGATC CCCTCATAAT TT |
ORF Summary
| Name | Associated TE | Coordinates | Orientation | Class | Subclass |
|---|---|---|---|---|---|
| tnp | IS10L | 108-1316 | + | Transposase |
ORF Details
| Gene Name | Protein Name | Associated TE | Gene Length | Coordinates | Strand | tnp | Tnp | IS10L | 402 | 108-1316 | + |
|---|
| Class: | Transposase | ||||||||||
| Function: | transposase | ||||||||||
| Transposase Chemistry: | DDE | ||||||||||
| Protein Sequence: | MCELDILHDS LYQFCPELHL KRLNSLTLAC HALLDCKTLT LTELGRNLPT KARTKHNIKR IDRLLGNRHL HKERLAVYRW HASFICSGNT MPIVLVDWSD IREQKRLMVL RASVALHGRS VTLYEKAFPL SEQCSKKAHD QFLADLASIL PSNTTPLIVS DAGFKVPWYK SVEKLGWYWL SRVRGKVQYA DLGAENWKPI SNLHDMSSSH SKTLGYKRLT KSNPISCQIL LYKSRSKGRK NQRSTRTHCH HPSPKIYSAS AKEPWILATN LPVEIRTPKQ LVNIYSKRMQ IEETFRDLKS PAYGLGLRHS RTSSSERFDI MLLIALMLQL TCWLAGVHAQ KQGWDKHFQA NTVRNRNVLS TVRLGMEVLR HSGYTITRED SLVAATLLTQ NLFTHGYVLG KL |
||||||||||
1. Chalmers R, Sewitz S, Lipkow K, Crellin P.
Complete nucleotide sequence of Tn10.. J Bacteriol. 2000 May;182(10):2970-2. doi: 10.1128/JB.182.10.2970-2972.2000. PubMed ID:
10781570
.