IS614
- Family IS1380
- Group IS942
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
AB042559 | ND | Bacteroides fragilis | Bacteroides fragilis Bacteroides dorei DSM 17855 Bacteroides finegoldii DSM 17565 |
DNA section
IS Length : 1596 bp
Ends
IR Length : 12/14
IRL : CCTTAATTCCGCAACACTTTGATTTAACTTTATTTATAAGTTCCTGAGCA
IRR : CCTAAAATCCGCAAGCAATCTCAATGGCAATCTCAATTGCAGTAAAGAGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TATTC | TTTTA | TATGC | 5 |
DNA sequence
CCTTAATTCCGCAACACTTTGATTTAACTTTATTTATAAGTTCCTGAGCAACAAAAAGTTGCTCAGGATTTTGCCATGTCAGATTTTTCACTTATCTTAG
TGTTGCAAATCAAAACAAGCGTAAATCGTAACAAGACATGGCAAAGGTACAAATAAAATCTGAAAAACTCACACCTTTTGGAGGAATTTTTTCAATCATG
GAGCAATTTGACTCCATGCTTTCACCTATTATCGACCAGACACTTGGTCAGAGATGCCGCAGTATCATCGGATACCAGTACAGCGAAATTATTCGTTCTC
TGATGAGCGTATACTTCTGTGGCGGTTCATGCGTGGAGGATGTAACATCGCATCTGATGCGTCATCTCTCGTATCATCCGACCTTGCGCACATGCAGCTC
TGATACCATCCTCAGAGCCATCAAGGAACTGACACAGGAAAACATCTCATATACTTCCGATAAGGGCAAGACCTATGATTTCAATACGGCAGACAAGCTC
AACGCCTTGCTTATAAAAGCCTTGGTTTCCACTGGTGAACTGAATGAGGTGGAAACCTACGATGTTGATTTCGACCATCAGTTCCTTGAAACAGAGAAGT
ATGATGCAAAACCGACATACAAGAAGTTCCTCGGCTACAGACCTGGCGTATATGTCATCGGTGACATGATTGTCTATGTCGAGAACAGCGATGGCAACAC
AAATGTGCGCTTTTATCAGGCTGAGACCCACAAGAGATTCTTTGCCCTACTGGAAGCCAACAGCATCCGTGTGAATCGCTTCAGAGCCGACTGTGGTTCG
TGCTCGAAGGAAATTGTCAGTGAGATAGAGAAGCATTGCACGCACTTCTACATCCGCGCCAACAGATGCAGTTCGCTCTACGATGACTTGTTTTCACTGA
GGGGATGGAAGACGGAGGAAATCAACGGCATCCAGTTTGAACTCAATTCCATTCTTGTTGAGAAATGGGAAGGCAAGTGCTATCGTCTTGTCATTCAGAG
ACAAAAGCGCATGGATGGAGAGCTTGACTTGTGGGAAGGTGAATACACCTACAGATCCATTCTTACCAACGATTATGACTCATCAACAAGAGACATCGTC
GAATTTTACAACAAGCGTGGGGGCAAAGAGCGTATATTCGATGATATGAACAACGGATTCGGCTGGAACAGGCTCCCCAAGTCGTTCATGTCAGAGAACA
CTGTATTCCTTCTGCTTACGGCATTGATACACAATTTCTATAAGACCATCATTAGCAAGCTTGACACCAAGGCTTTCGGGCTCAAGGAAACGAGTCGCAT
AAAGGCTTTTGTCTTCAGCTTCATCTCCGTACCTGCCAAGTGGATCATGACAGCAAGGCAATACGTGCTGAATATCTATACTGAAAACCGGGCTTATGCA
AGACCTTTCAAAACTGGATTCGGATAAAGTCCGTTCCTTATGGTTTTAATCTGCGTATTGCCTCAAGTCGCATTGTGGGGTAAGGGGAAGGTATGCACAA
ATCGGACAAAATTCACGCTCATACTATCATGATGCATAGTGTTCAAGCTCTTTACTGCAATTGAGATTGCCATTGAGATTGCTTGCGGATTTTAGG
TGTTGCAAATCAAAACAAGCGTAAATCGTAACAAGACATGGCAAAGGTACAAATAAAATCTGAAAAACTCACACCTTTTGGAGGAATTTTTTCAATCATG
GAGCAATTTGACTCCATGCTTTCACCTATTATCGACCAGACACTTGGTCAGAGATGCCGCAGTATCATCGGATACCAGTACAGCGAAATTATTCGTTCTC
TGATGAGCGTATACTTCTGTGGCGGTTCATGCGTGGAGGATGTAACATCGCATCTGATGCGTCATCTCTCGTATCATCCGACCTTGCGCACATGCAGCTC
TGATACCATCCTCAGAGCCATCAAGGAACTGACACAGGAAAACATCTCATATACTTCCGATAAGGGCAAGACCTATGATTTCAATACGGCAGACAAGCTC
AACGCCTTGCTTATAAAAGCCTTGGTTTCCACTGGTGAACTGAATGAGGTGGAAACCTACGATGTTGATTTCGACCATCAGTTCCTTGAAACAGAGAAGT
ATGATGCAAAACCGACATACAAGAAGTTCCTCGGCTACAGACCTGGCGTATATGTCATCGGTGACATGATTGTCTATGTCGAGAACAGCGATGGCAACAC
AAATGTGCGCTTTTATCAGGCTGAGACCCACAAGAGATTCTTTGCCCTACTGGAAGCCAACAGCATCCGTGTGAATCGCTTCAGAGCCGACTGTGGTTCG
TGCTCGAAGGAAATTGTCAGTGAGATAGAGAAGCATTGCACGCACTTCTACATCCGCGCCAACAGATGCAGTTCGCTCTACGATGACTTGTTTTCACTGA
GGGGATGGAAGACGGAGGAAATCAACGGCATCCAGTTTGAACTCAATTCCATTCTTGTTGAGAAATGGGAAGGCAAGTGCTATCGTCTTGTCATTCAGAG
ACAAAAGCGCATGGATGGAGAGCTTGACTTGTGGGAAGGTGAATACACCTACAGATCCATTCTTACCAACGATTATGACTCATCAACAAGAGACATCGTC
GAATTTTACAACAAGCGTGGGGGCAAAGAGCGTATATTCGATGATATGAACAACGGATTCGGCTGGAACAGGCTCCCCAAGTCGTTCATGTCAGAGAACA
CTGTATTCCTTCTGCTTACGGCATTGATACACAATTTCTATAAGACCATCATTAGCAAGCTTGACACCAAGGCTTTCGGGCTCAAGGAAACGAGTCGCAT
AAAGGCTTTTGTCTTCAGCTTCATCTCCGTACCTGCCAAGTGGATCATGACAGCAAGGCAATACGTGCTGAATATCTATACTGAAAACCGGGCTTATGCA
AGACCTTTCAAAACTGGATTCGGATAAAGTCCGTTCCTTATGGTTTTAATCTGCGTATTGCCTCAAGTCGCATTGTGGGGTAAGGGGAAGGTATGCACAA
ATCGGACAAAATTCACGCTCATACTATCATGATGCATAGTGTTCAAGCTCTTTACTGCAATTGAGATTGCCATTGAGATTGCTTGCGGATTTTAGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1290 bp | 429 aa | 138 | 1427 | + | No |
Chemistry : DDE
ORF sequence :
MAKVQIKSEKLTPFGGIFSIMEQFDSMLSPIIDQTLGQRCRSIIGYQYSEIIRSLMSVYFCGGSCVEDVTSHLMRHLSYHPTLRTCSSDTILRAIKELTQ
ENISYTSDKGKTYDFNTADKLNALLIKALVSTGELNEVETYDVDFDHQFLETEKYDAKPTYKKFLGYRPGVYVIGDMIVYVENSDGNTNVRFYQAETHKR
FFALLEANSIRVNRFRADCGSCSKEIVSEIEKHCTHFYIRANRCSSLYDDLFSLRGWKTEEINGIQFELNSILVEKWEGKCYRLVIQRQKRMDGELDLWE
GEYTYRSILTNDYDSSTRDIVEFYNKRGGKERIFDDMNNGFGWNRLPKSFMSENTVFLLLTALIHNFYKTIISKLDTKAFGLKETSRIKAFVFSFISVPA
KWIMTARQYVLNIYTENRAYARPFKTGFG
ENISYTSDKGKTYDFNTADKLNALLIKALVSTGELNEVETYDVDFDHQFLETEKYDAKPTYKKFLGYRPGVYVIGDMIVYVENSDGNTNVRFYQAETHKR
FFALLEANSIRVNRFRADCGSCSKEIVSEIEKHCTHFYIRANRCSSLYDDLFSLRGWKTEEINGIQFELNSILVEKWEGKCYRLVIQRQKRMDGELDLWE
GEYTYRSILTNDYDSSTRDIVEFYNKRGGKERIFDDMNNGFGWNRLPKSFMSENTVFLLLTALIHNFYKTIISKLDTKAFGLKETSRIKAFVFSFISVPA
KWIMTARQYVLNIYTENRAYARPFKTGFG
Blast result :
Comments
IS614 is 87% aa similar to IS613.
References
1] Kato,N., Yamazoe,K., Han,C.G. and Ohtsubo,E. (2003) Antimicrob. Agents Chemother. 47 (3), 979-985