IS614

  • Family IS1380
  • Group IS942
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
AB042559 ND Bacteroides fragilis
Bacteroides fragilis
Bacteroides dorei DSM 17855
Bacteroides finegoldii DSM 17565
DNA section
IS Length : 1596 bp

Ends


IR Length : 12/14

IRL : CCTTAATTCCGCAACACTTTGATTTAACTTTATTTATAAGTTCCTGAGCA
IRR : CCTAAAATCCGCAAGCAATCTCAATGGCAATCTCAATTGCAGTAAAGAGC

Insertion site


Left flankDirect repeatRight flankDR Length
TATTCTTTTATATGC5

DNA sequence

CCTTAATTCCGCAACACTTTGATTTAACTTTATTTATAAGTTCCTGAGCAACAAAAAGTTGCTCAGGATTTTGCCATGTCAGATTTTTCACTTATCTTAG
TGTTGCAAATCAAAACAAGCGTAAATCGTAACAAGACATGGCAAAGGTACAAATAAAATCTGAAAAACTCACACCTTTTGGAGGAATTTTTTCAATCATG
GAGCAATTTGACTCCATGCTTTCACCTATTATCGACCAGACACTTGGTCAGAGATGCCGCAGTATCATCGGATACCAGTACAGCGAAATTATTCGTTCTC
TGATGAGCGTATACTTCTGTGGCGGTTCATGCGTGGAGGATGTAACATCGCATCTGATGCGTCATCTCTCGTATCATCCGACCTTGCGCACATGCAGCTC
TGATACCATCCTCAGAGCCATCAAGGAACTGACACAGGAAAACATCTCATATACTTCCGATAAGGGCAAGACCTATGATTTCAATACGGCAGACAAGCTC
AACGCCTTGCTTATAAAAGCCTTGGTTTCCACTGGTGAACTGAATGAGGTGGAAACCTACGATGTTGATTTCGACCATCAGTTCCTTGAAACAGAGAAGT
ATGATGCAAAACCGACATACAAGAAGTTCCTCGGCTACAGACCTGGCGTATATGTCATCGGTGACATGATTGTCTATGTCGAGAACAGCGATGGCAACAC
AAATGTGCGCTTTTATCAGGCTGAGACCCACAAGAGATTCTTTGCCCTACTGGAAGCCAACAGCATCCGTGTGAATCGCTTCAGAGCCGACTGTGGTTCG
TGCTCGAAGGAAATTGTCAGTGAGATAGAGAAGCATTGCACGCACTTCTACATCCGCGCCAACAGATGCAGTTCGCTCTACGATGACTTGTTTTCACTGA
GGGGATGGAAGACGGAGGAAATCAACGGCATCCAGTTTGAACTCAATTCCATTCTTGTTGAGAAATGGGAAGGCAAGTGCTATCGTCTTGTCATTCAGAG
ACAAAAGCGCATGGATGGAGAGCTTGACTTGTGGGAAGGTGAATACACCTACAGATCCATTCTTACCAACGATTATGACTCATCAACAAGAGACATCGTC
GAATTTTACAACAAGCGTGGGGGCAAAGAGCGTATATTCGATGATATGAACAACGGATTCGGCTGGAACAGGCTCCCCAAGTCGTTCATGTCAGAGAACA
CTGTATTCCTTCTGCTTACGGCATTGATACACAATTTCTATAAGACCATCATTAGCAAGCTTGACACCAAGGCTTTCGGGCTCAAGGAAACGAGTCGCAT
AAAGGCTTTTGTCTTCAGCTTCATCTCCGTACCTGCCAAGTGGATCATGACAGCAAGGCAATACGTGCTGAATATCTATACTGAAAACCGGGCTTATGCA
AGACCTTTCAAAACTGGATTCGGATAAAGTCCGTTCCTTATGGTTTTAATCTGCGTATTGCCTCAAGTCGCATTGTGGGGTAAGGGGAAGGTATGCACAA
ATCGGACAAAATTCACGCTCATACTATCATGATGCATAGTGTTCAAGCTCTTTACTGCAATTGAGATTGCCATTGAGATTGCTTGCGGATTTTAGG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1290 bp429 aa1381427+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAKVQIKSEKLTPFGGIFSIMEQFDSMLSPIIDQTLGQRCRSIIGYQYSEIIRSLMSVYFCGGSCVEDVTSHLMRHLSYHPTLRTCSSDTILRAIKELTQ
ENISYTSDKGKTYDFNTADKLNALLIKALVSTGELNEVETYDVDFDHQFLETEKYDAKPTYKKFLGYRPGVYVIGDMIVYVENSDGNTNVRFYQAETHKR
FFALLEANSIRVNRFRADCGSCSKEIVSEIEKHCTHFYIRANRCSSLYDDLFSLRGWKTEEINGIQFELNSILVEKWEGKCYRLVIQRQKRMDGELDLWE
GEYTYRSILTNDYDSSTRDIVEFYNKRGGKERIFDDMNNGFGWNRLPKSFMSENTVFLLLTALIHNFYKTIISKLDTKAFGLKETSRIKAFVFSFISVPA
KWIMTARQYVLNIYTENRAYARPFKTGFG

 

Blast result :
Comments
IS614 is 87% aa similar to IS613.
References
1] Kato,N., Yamazoe,K., Han,C.G. and Ohtsubo,E. (2003) Antimicrob. Agents Chemother. 47 (3), 979-985