IS15
- Family IS6
- Group
Isoform IS26Synonym(s) IS15L, IS15R, IS1522
Accession number | Transposition | Origin | Host |
---|---|---|---|
M12900 | Y | Salmonella panama | Salmonella ordonez plasmid pIP565 Salmonella panama LA46 plasmid pIP112 Klebsiella aerogenes K-16R13 plasmid pTH1 Klebsiella pneumoniae 68M plasmid pIP151 Salmonella ordonez BM2000 |
DNA section
IS Length : 1648 bp
Ends
IR Length : 14
IRL : GGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCT
IRR : GGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
NNNNGGCGCA | TCTCGGGC | AGCGTTNNNN | 8 |
DNA sequence
GGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCTGATGGAGCTGCACATGAACCCATTCAAAGGCCGGCATTTTCAGCGTGACA
TCATTCTGTGGGCCGTACGCTGGTACTGCAAATACGGCATCAGTTACCGTGAGCTGCAGGAGATGCTGGCTGAACGCGGAGTGAATGTCGATCACTCCAC
GATTTACCGCTGGGTTCAGCGTTATGCGCCTGAAATGGAAAAACGGCTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAA
ACCTACGTGAAGGTCAATGGCCGCTGGGCGTATCTGTACCGGGCCGTCGACAGCCGGGGCCGCACTGTCGATTTTTATCTCTCCTCCCGTCGTAACAGCA
AAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAAGTGGCAGATCCCGCGATTCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGC
GCTTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTTGAACACCGACAGATTAAGTACCGGAACAACGTGATTGAATGCGATCATGGCAAACTG
AAACGGATAATCGGCGCCACGCTGGGATTTAAATCCATGAAGACGGCTTACGCGGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTT
GCTGATGGAGCTGCACATGAACCCATTCAAAGGCCGGCATTTTCAGCGTGACATCATTCTGTGGGCCGTACGCTGGTACTGCAAATACGGCATCAGTTAC
CGTGAGCTGCAGGAGATGCTGGCTGAACGCGGAGTGAATGTCGATCACTCCACGATTTACCGCTGGGTTCAGCGTTATGCGCCTGAAATGGAAAAACGGC
TGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAAACCTACGTGAAGGTCAATGGCCGCTGGGCGTATCTGTACCGGGCCGT
CGACAGCCGGGGCCGCACTGTCGATTTTTATCTCTCCTCCCGTCGTAACAGCAAAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAAG
TGGCAGATCCCACGATTCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGCGCTTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTTGAAC
ACCGACAGATTAAGTACCGGAACAACGTGATTGAATGCGATCATGGCAAACTGAAACGGATAATCAACGCCACGCTGGGATTTAAATCCATGAAGACGGC
TTACGCCACCATCAAAGGTATTGAGGTGATGCGTGCACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCCTGGTA
AGCAGAGTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGCTAACTTTGCAACAGTGCCGCTTACGCCACCATCAAAGGTATTGAG
GTGATGCGTGCACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCCTGGTAAGCAGAGTTTTTGAAACGTAAGGCC
TTTGAATAAGACAAAAGGCTGCCTCATCGCTAACTTTGCAACAGTGCC
TCATTCTGTGGGCCGTACGCTGGTACTGCAAATACGGCATCAGTTACCGTGAGCTGCAGGAGATGCTGGCTGAACGCGGAGTGAATGTCGATCACTCCAC
GATTTACCGCTGGGTTCAGCGTTATGCGCCTGAAATGGAAAAACGGCTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAA
ACCTACGTGAAGGTCAATGGCCGCTGGGCGTATCTGTACCGGGCCGTCGACAGCCGGGGCCGCACTGTCGATTTTTATCTCTCCTCCCGTCGTAACAGCA
AAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAAGTGGCAGATCCCGCGATTCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGC
GCTTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTTGAACACCGACAGATTAAGTACCGGAACAACGTGATTGAATGCGATCATGGCAAACTG
AAACGGATAATCGGCGCCACGCTGGGATTTAAATCCATGAAGACGGCTTACGCGGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTT
GCTGATGGAGCTGCACATGAACCCATTCAAAGGCCGGCATTTTCAGCGTGACATCATTCTGTGGGCCGTACGCTGGTACTGCAAATACGGCATCAGTTAC
CGTGAGCTGCAGGAGATGCTGGCTGAACGCGGAGTGAATGTCGATCACTCCACGATTTACCGCTGGGTTCAGCGTTATGCGCCTGAAATGGAAAAACGGC
TGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAAACCTACGTGAAGGTCAATGGCCGCTGGGCGTATCTGTACCGGGCCGT
CGACAGCCGGGGCCGCACTGTCGATTTTTATCTCTCCTCCCGTCGTAACAGCAAAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAAG
TGGCAGATCCCACGATTCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGCGCTTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTTGAAC
ACCGACAGATTAAGTACCGGAACAACGTGATTGAATGCGATCATGGCAAACTGAAACGGATAATCAACGCCACGCTGGGATTTAAATCCATGAAGACGGC
TTACGCCACCATCAAAGGTATTGAGGTGATGCGTGCACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCCTGGTA
AGCAGAGTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGCTAACTTTGCAACAGTGCCGCTTACGCCACCATCAAAGGTATTGAG
GTGATGCGTGCACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCCTGGTAAGCAGAGTTTTTGAAACGTAAGGCC
TTTGAATAAGACAAAAGGCTGCCTCATCGCTAACTTTGCAACAGTGCC
Protein section
ORF number : 2
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
642 bp | 213 aa | 64 | 705 | + | No |
Description :
ORF sequence :
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGR
TVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYAALL
QIVGGDKLIIPFC
TVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYAALL
QIVGGDKLIIPFC
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
705 bp | 234 aa | 717 | 1421 | + | No |
Description :
ORF sequence :
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGR
TVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIK
GIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
TVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIK
GIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Blast result :
Comments
IS15 (functionally active) corresponds to the insertion of IS15-DI into IS15-DII (4 bp different). The major event mediated by IS15 and IS15D is the formation of cointegrates through replicative transposition.
This IS is found in Tn1525 from pIP112 of Salmonella panama LA46.
This IS is found in Tn1525 from pIP112 of Salmonella panama LA46.
References
1] Labigne-Roussel, A., Gerbaud, G., and Courvalin, P. (1981) Mol. Gen. Genet. 182, 390-408
2] Labigne-Roussel, A., Briaux-Gerbaud, S., and Courvalin, P. (1983) Mol. Gen. Genet. 189, 90-101.
3] Labigne-Roussel, A., and Courvalin, P. (1983) Mol. Gen. Genet. 189, 102-112.
4] Trieu-Cuot, P., Labigne-Roussel, A., and Courvalin, P. (1983) Gene 24, 125-129.
5] Trieu-Cuot, P., and Courvalin, P. (1984) Gene 30, 113-120.
6] Trieu-Cuot, P., and Courvalin, P. (1985) Plasmid 14, 80-89.
2] Labigne-Roussel, A., Briaux-Gerbaud, S., and Courvalin, P. (1983) Mol. Gen. Genet. 189, 90-101.
3] Labigne-Roussel, A., and Courvalin, P. (1983) Mol. Gen. Genet. 189, 102-112.
4] Trieu-Cuot, P., Labigne-Roussel, A., and Courvalin, P. (1983) Gene 24, 125-129.
5] Trieu-Cuot, P., and Courvalin, P. (1984) Gene 30, 113-120.
6] Trieu-Cuot, P., and Courvalin, P. (1985) Plasmid 14, 80-89.