IS10L
- Family IS4
- Group IS10
Isoform IS10RSynonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
J01829 | Salmonella typhimurium | Salmonella typhimurium |
DNA section
IS Length : 1329 bp
Ends
IR Length : 17/22
IRL : CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGAT
IRR : CTGAGAGATCCCCTCATAATTTCCCCAAAACGTAACCATGTGTGAATAGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGATACACATCTTGTCATATCATCAAATGGTTTCGCCAAAAATCAATAATCAGA
CAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCAC
GCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGT
TAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTG
GTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCA
GAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCACTGATGCTGGCTTTA
AAGTGCCATGGTATAAATCCGTTGAGAAGCTGGGTTGGTACTGGTTAAGTCGACTAAGAGGAAAAGTACAATATGCAGACCTAGGAGCGGAAAACTGGAA
ACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTACGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTG
TATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGCTCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCGTCGGCAAAGGAGCCAT
CGGTTCTAGCAACTAACTTACCTGTTGAAATTCGAACACCCAAACAACTTGTTAATATCTATTCGAAGCGAATGCAGATTGAAGAAACCTTCCGAGACTT
GAAAAGTCCTGCCTACGGACTAGGCCTACGCCATAGCCGAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACA
TGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAC
GCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTCACTCGTGGCTGCAACCCTGCTAGCTCAAAATCTATTCACACATGGTTACGT
TTTGGGGAAATTATGAGGGGATCTCTCAG
CAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCAC
GCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGT
TAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTG
GTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCA
GAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCACTGATGCTGGCTTTA
AAGTGCCATGGTATAAATCCGTTGAGAAGCTGGGTTGGTACTGGTTAAGTCGACTAAGAGGAAAAGTACAATATGCAGACCTAGGAGCGGAAAACTGGAA
ACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTACGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTG
TATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGCTCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCGTCGGCAAAGGAGCCAT
CGGTTCTAGCAACTAACTTACCTGTTGAAATTCGAACACCCAAACAACTTGTTAATATCTATTCGAAGCGAATGCAGATTGAAGAAACCTTCCGAGACTT
GAAAAGTCCTGCCTACGGACTAGGCCTACGCCATAGCCGAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACA
TGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAC
GCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTCACTCGTGGCTGCAACCCTGCTAGCTCAAAATCTATTCACACATGGTTACGT
TTTGGGGAAATTATGAGGGGATCTCTCAG
Protein section
ORF number : 0
Comments
IS10L (the left element of the composite TetR transposon Tn10) is defective (18 differences with IS10R, including seven in the regulatory region of the transposase gene).
References
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