ISVa2
- Family IS5
- Group IS903
Isoform Synonym(s) ISV-A2
Accession number | Transposition | Origin | Host |
---|---|---|---|
L40498 | ND | Vibrio anguillarum | Vibrio anguillarum 775 plasmid pJM1 |
DNA section
IS Length : 1054 bp
Ends
IR Length : 21/25
IRL : GGCTTTGTTGCTTAAATCGATGGAACTAAATCTAGAAGCTACGATCTGAT
IRR : GGCTTTGTTGCTTAATTCGGTTGTAAGACATGGCAGCCCAAAGTTGTTCA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
NNNNNNNNNN | CCTCTGAAC | NNNNNNNNNN | 9 |
DNA sequence
GGCTTTGTTGCTTAAATCGATGGAACTAAATCTAGAAGCTACGATCTGATCGGCTACACCCATCAATCGTCGTAGCCTCATGCCTAAACCTCGTTACAAA
ACAACTAACTGGAAACAGTACAACAAAGCCTTAATCAACCGTGGTTCTCTGACCTTTTGGATTGATGAGGAAACGATAGCTGAGTGGAAACAAAACAAAC
AAGGCAAGCGTGGTAGACCTCGTCGATTCAGCGACTTAGCCATTACTACAGCACTGATGGTAAAACGCGTTTTCTCTATGCCGTTGAGAGCGCTACAAGG
TTTTCTAGACTCTGTATTTAAGCTGGCTAACATCCCGCTTGTTTGCCCGCACTACACCTGTATAAGCCGCCGAGCTAAGGAAGTTGAGGTTTCATTTAAA
ACCAAAACCAGAGGAGCAATACAACACCTGGCAATTGATGCCACTGGCCTCAAGGTTTATGGCGAGGGTGAATGGAGGGTCAAGAAGCATGGTACTGATG
GGAAGCGCAGAGTCTGGCGTAAACTGCATATTGCAGTAGATACAAGCACTCACGAAATAGTCGCAGCAGAGCTGAGTTTATCTAACGTAACCGATTCCGA
AGTGCTCCCCAACTTACTCAAGCAAACGCGTCGTAAAATAATTGAAATATCAGGTGATGGTGCTTATGACACAAGGAATTGTCATGATGCGATAAGGATT
AAGCAAGCGGTTGCGCTTATCCCACCACGAGAAGGGGCTGCATTCTGGGAACAAGGGCACCCTCGTAATTTAGCAGTAGGTTGTCAAAAGCTCTACGGCT
CCAACAAGAAATGGAAAAAGCGGTATGGCTATCATAAGCGCTCACTATCAGAGACAGCAATGTACCGAGTAAAACAGCTGCTAGGTGGGAAATTAAGCCT
AAGAAATTACAATGCTCAGGTTGGCGAGACTTACGCTATGATCAAAGCGCTGAACAAGCTTACAGGACTTGGTATGCCTGAAACTCAGTATATTGCTTAA
TAACTGAACAACTTTGGGCTGCCATGTCTTACAACCGAATTAAGCAACAAAGCC
ACAACTAACTGGAAACAGTACAACAAAGCCTTAATCAACCGTGGTTCTCTGACCTTTTGGATTGATGAGGAAACGATAGCTGAGTGGAAACAAAACAAAC
AAGGCAAGCGTGGTAGACCTCGTCGATTCAGCGACTTAGCCATTACTACAGCACTGATGGTAAAACGCGTTTTCTCTATGCCGTTGAGAGCGCTACAAGG
TTTTCTAGACTCTGTATTTAAGCTGGCTAACATCCCGCTTGTTTGCCCGCACTACACCTGTATAAGCCGCCGAGCTAAGGAAGTTGAGGTTTCATTTAAA
ACCAAAACCAGAGGAGCAATACAACACCTGGCAATTGATGCCACTGGCCTCAAGGTTTATGGCGAGGGTGAATGGAGGGTCAAGAAGCATGGTACTGATG
GGAAGCGCAGAGTCTGGCGTAAACTGCATATTGCAGTAGATACAAGCACTCACGAAATAGTCGCAGCAGAGCTGAGTTTATCTAACGTAACCGATTCCGA
AGTGCTCCCCAACTTACTCAAGCAAACGCGTCGTAAAATAATTGAAATATCAGGTGATGGTGCTTATGACACAAGGAATTGTCATGATGCGATAAGGATT
AAGCAAGCGGTTGCGCTTATCCCACCACGAGAAGGGGCTGCATTCTGGGAACAAGGGCACCCTCGTAATTTAGCAGTAGGTTGTCAAAAGCTCTACGGCT
CCAACAAGAAATGGAAAAAGCGGTATGGCTATCATAAGCGCTCACTATCAGAGACAGCAATGTACCGAGTAAAACAGCTGCTAGGTGGGAAATTAAGCCT
AAGAAATTACAATGCTCAGGTTGGCGAGACTTACGCTATGATCAAAGCGCTGAACAAGCTTACAGGACTTGGTATGCCTGAAACTCAGTATATTGCTTAA
TAACTGAACAACTTTGGGCTGCCATGTCTTACAACCGAATTAAGCAACAAAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
921 bp | 306 aa | 80 | 1000 | + | No |
Chemistry : DDE
ORF sequence :
MPKPRYKTTNWKQYNKALINRGSLTFWIDEETIAEWKQNKQGKRGRPRRFSDLAITTALMVKRVFSMPLRALQGFLDSVFKLANIPLVCPHYTCISRRAK
EVEVSFKTKTRGAIQHLAIDATGLKVYGEGEWRVKKHGTDGKRRVWRKLHIAVDTSTHEIVAAELSLSNVTDSEVLPNLLKQTRRKIIEISGDGAYDTRN
CHDAIRIKQAVALIPPREGAAFWEQGHPRNLAVGCQKLYGSNKKWKKRYGYHKRSLSETAMYRVKQLLGGKLSLRNYNAQVGETYAMIKALNKLTGLGMP
ETQYIA
EVEVSFKTKTRGAIQHLAIDATGLKVYGEGEWRVKKHGTDGKRRVWRKLHIAVDTSTHEIVAAELSLSNVTDSEVLPNLLKQTRRKIIEISGDGAYDTRN
CHDAIRIKQAVALIPPREGAAFWEQGHPRNLAVGCQKLYGSNKKWKKRYGYHKRSLSETAMYRVKQLLGGKLSLRNYNAQVGETYAMIKALNKLTGLGMP
ETQYIA
Blast result :
Comments
Vibrio anguillarum is the causative agent of vibriosis, a septicemic disease of marine fish. ISVa1 and ISVa2 flank the iron transport genes, fatA (ferric anguibactin transport), fatB, fatC and fatD (composed of the siderophore anguibactin and a receptor complex that recognizes ferric anguibactin) and the angR (regulator gene). ISVa1 and ISVa2 transposases are 60 % identical.
References
1] Tolmaski, M.E., and Crosa, J.H. (1995) Plasmid 33, 180-190.