IST445
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
Y18309 | ND | Thiobacillus ferrooxidans | Thiobacillus ferrooxidans |
DNA section
IS Length : 1219 bp
Ends
IR Length : 14/23
IRL : GGCTCTTCTGCGGATTGAGTGGGTAGGGGGTAGAATGCTGTGGAGCAGTT
IRR : GGCTCTTCGTCATTTTCAAGTGGGTAGCCTGAGATCCAGCTTACCCAGGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
GGCTCTTCTGCGGATTGAGTGGGTAGGGGGTAGAATGCTGTGGAGCAGTTGGGTCCCGAATAGGAGTTAGCTGATGGTCCCAGAAGATCTGTTTTCTCTC
GCGTTAGGGTTGGTACCGCCGGTGGTTGGTGGACGGAATGTGACCTTCCAAGTGGAGGAGAAGCGCCTGGATCTGCACATCAACTTTCCCAAGGGCAGTC
GCTTTGCTTGCCCGTATGTGGTGAGGAGTGTCCGGTACATGCACCCTGGAACTATACCGGCGGCACATGGTTTATTTCAGCATGAAGTCCTATCCCACGC
CGCTGACCCTGGTCGGAGATGCCAGTATTGACGGTAGCCCGCTGGTCGGCGAGCCGACACGCTCCTGTGCGGGTGATTGACCATTATGTGCCCGAAGCCC
GTACCAGGGTGGATATGGCCAAATGTCCATGCCCGGTTCGGCGTCGAATTGAGAACCAAGCAGTCGGCGCGGTCATGACTACAATCACGCTCTTCGTGGA
TCTGAATGCCCGGCGACTCTTGTTCCGTACGCCCGGCAAGGATGCCAAGACCTTTGAGAAATTCTCCGAAGATCTACAGGCCCATGGTGGTAGCGCGGAA
GGCATCAACCGAATTGTGAGCATGGCCCTCTCGCCGGCCTTCCAGAAAGGGGCTTGCCGAAGCACCTGCCCAATGCTGAGATCACCTTCGAATCGTTTTC
ACCTCATGAAGCTCGTTCAACGAGGCCGTGGATGCCGTGCGCAAGGGGGAAGTCCTTCACCCAGCCAAATCTCAAAAAGACCCGCTGGCTCTGGCTCAAG
AATGATTGTAACCTCAAGGCCAGGCAGAAAGAAAAGCTGCAGGAATTATTAAAAGACCAGAACCTGAAAACGGCACAGGCCTACCAGTTTCGCTGACTTT
TCAGGCATTCTTCACAGTCAAGAATCGCACCAGGGCGCCAACCCTGCTCAAGGCCTGGATGGAAAACGCCAAGGACAGCGGAATGCCGCCTATGGTCAAG
GTCGCCTACACCATTCCATTGAACAATTGGGATGGCCGTTGCTTCCGCTGGTTCGAAAAGCCAGATTACCAATGGAATTCTTGGAAGGCTTCAACAGCCT
CAATCAATCCGCCAAGGCCAAGGCCCGGGGTTACCGACCACAAGAATTTTATCAACATGGCCTACCTGATCCTGGGTAAGCTGGATCTCAGGCTACCCAC
TTGAAAATGACGAAGAGCC
GCGTTAGGGTTGGTACCGCCGGTGGTTGGTGGACGGAATGTGACCTTCCAAGTGGAGGAGAAGCGCCTGGATCTGCACATCAACTTTCCCAAGGGCAGTC
GCTTTGCTTGCCCGTATGTGGTGAGGAGTGTCCGGTACATGCACCCTGGAACTATACCGGCGGCACATGGTTTATTTCAGCATGAAGTCCTATCCCACGC
CGCTGACCCTGGTCGGAGATGCCAGTATTGACGGTAGCCCGCTGGTCGGCGAGCCGACACGCTCCTGTGCGGGTGATTGACCATTATGTGCCCGAAGCCC
GTACCAGGGTGGATATGGCCAAATGTCCATGCCCGGTTCGGCGTCGAATTGAGAACCAAGCAGTCGGCGCGGTCATGACTACAATCACGCTCTTCGTGGA
TCTGAATGCCCGGCGACTCTTGTTCCGTACGCCCGGCAAGGATGCCAAGACCTTTGAGAAATTCTCCGAAGATCTACAGGCCCATGGTGGTAGCGCGGAA
GGCATCAACCGAATTGTGAGCATGGCCCTCTCGCCGGCCTTCCAGAAAGGGGCTTGCCGAAGCACCTGCCCAATGCTGAGATCACCTTCGAATCGTTTTC
ACCTCATGAAGCTCGTTCAACGAGGCCGTGGATGCCGTGCGCAAGGGGGAAGTCCTTCACCCAGCCAAATCTCAAAAAGACCCGCTGGCTCTGGCTCAAG
AATGATTGTAACCTCAAGGCCAGGCAGAAAGAAAAGCTGCAGGAATTATTAAAAGACCAGAACCTGAAAACGGCACAGGCCTACCAGTTTCGCTGACTTT
TCAGGCATTCTTCACAGTCAAGAATCGCACCAGGGCGCCAACCCTGCTCAAGGCCTGGATGGAAAACGCCAAGGACAGCGGAATGCCGCCTATGGTCAAG
GTCGCCTACACCATTCCATTGAACAATTGGGATGGCCGTTGCTTCCGCTGGTTCGAAAAGCCAGATTACCAATGGAATTCTTGGAAGGCTTCAACAGCCT
CAATCAATCCGCCAAGGCCAAGGCCCGGGGTTACCGACCACAAGAATTTTATCAACATGGCCTACCTGATCCTGGGTAAGCTGGATCTCAGGCTACCCAC
TTGAAAATGACGAAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1131 bp | 376 aa | 74 | 1204 | + | No |
Chemistry : Unknow
ORF sequence :
Blast result :
Comments
These sequence carries many ponctual mutations occuring frameshifts and STOP codons.
References
1] Chakraborty,R., Deb,C., Lohia,A. and Roy,P. (1997) Plasmid 38 (2), 129-134