IST445

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
Y18309 ND Thiobacillus ferrooxidans
Thiobacillus ferrooxidans
DNA section
IS Length : 1219 bp

Ends


IR Length : 14/23

IRL : GGCTCTTCTGCGGATTGAGTGGGTAGGGGGTAGAATGCTGTGGAGCAGTT
IRR : GGCTCTTCGTCATTTTCAAGTGGGTAGCCTGAGATCCAGCTTACCCAGGA

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

GGCTCTTCTGCGGATTGAGTGGGTAGGGGGTAGAATGCTGTGGAGCAGTTGGGTCCCGAATAGGAGTTAGCTGATGGTCCCAGAAGATCTGTTTTCTCTC
GCGTTAGGGTTGGTACCGCCGGTGGTTGGTGGACGGAATGTGACCTTCCAAGTGGAGGAGAAGCGCCTGGATCTGCACATCAACTTTCCCAAGGGCAGTC
GCTTTGCTTGCCCGTATGTGGTGAGGAGTGTCCGGTACATGCACCCTGGAACTATACCGGCGGCACATGGTTTATTTCAGCATGAAGTCCTATCCCACGC
CGCTGACCCTGGTCGGAGATGCCAGTATTGACGGTAGCCCGCTGGTCGGCGAGCCGACACGCTCCTGTGCGGGTGATTGACCATTATGTGCCCGAAGCCC
GTACCAGGGTGGATATGGCCAAATGTCCATGCCCGGTTCGGCGTCGAATTGAGAACCAAGCAGTCGGCGCGGTCATGACTACAATCACGCTCTTCGTGGA
TCTGAATGCCCGGCGACTCTTGTTCCGTACGCCCGGCAAGGATGCCAAGACCTTTGAGAAATTCTCCGAAGATCTACAGGCCCATGGTGGTAGCGCGGAA
GGCATCAACCGAATTGTGAGCATGGCCCTCTCGCCGGCCTTCCAGAAAGGGGCTTGCCGAAGCACCTGCCCAATGCTGAGATCACCTTCGAATCGTTTTC
ACCTCATGAAGCTCGTTCAACGAGGCCGTGGATGCCGTGCGCAAGGGGGAAGTCCTTCACCCAGCCAAATCTCAAAAAGACCCGCTGGCTCTGGCTCAAG
AATGATTGTAACCTCAAGGCCAGGCAGAAAGAAAAGCTGCAGGAATTATTAAAAGACCAGAACCTGAAAACGGCACAGGCCTACCAGTTTCGCTGACTTT
TCAGGCATTCTTCACAGTCAAGAATCGCACCAGGGCGCCAACCCTGCTCAAGGCCTGGATGGAAAACGCCAAGGACAGCGGAATGCCGCCTATGGTCAAG
GTCGCCTACACCATTCCATTGAACAATTGGGATGGCCGTTGCTTCCGCTGGTTCGAAAAGCCAGATTACCAATGGAATTCTTGGAAGGCTTCAACAGCCT
CAATCAATCCGCCAAGGCCAAGGCCCGGGGTTACCGACCACAAGAATTTTATCAACATGGCCTACCTGATCCTGGGTAAGCTGGATCTCAGGCTACCCAC
TTGAAAATGACGAAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1131 bp376 aa741204+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

 

Blast result :
Comments
These sequence carries many ponctual mutations occuring frameshifts and STOP codons.
References
1] Chakraborty,R., Deb,C., Lohia,A. and Roy,P. (1997) Plasmid 38 (2), 129-134