ISSpn1
- Family IS3
- Group IS3
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| Z67739 | ND | Streptococcus pneumoniae | Streptococcus pneumoniae |
DNA section
IS Length : 435 bp
Ends
IR Length :
IRL :
IRR :
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|
DNA sequence
AAGCTTTACTTATCACCAGTTTTAGATGGCTTTAACAGCGAAATTATTGCTTTTAATCTTTCTTGTTCGCCTAATTTAGAACAAGTACAAACCATGTTGG
AACAGGCATTCACAGAGAAGCACTACGAGAATACGATTCTCCATAGTGACCAAGGCTGGCAATACCAACACGATTCTTATCATCGGTTCCTAGAGAATAA
GGGAATTCAAGCATCTATGTCACGCAAGGGAAACAGCCAAGACAACGGTATGATGGAATCTTTCTTTGGCATTTTAAAATCCGAAATGTTTTATGGCTAT
GAGAAAACATTTAAATCACTTAACCAATTGGAACAAGTCATTATAGACTATATTGATTACTACAACAATAAACGAATTAAGATAAAACTAAAAGGACTTA
GCCCTGTGCAATACAGAACTAAATCCTTCGGATAA
AACAGGCATTCACAGAGAAGCACTACGAGAATACGATTCTCCATAGTGACCAAGGCTGGCAATACCAACACGATTCTTATCATCGGTTCCTAGAGAATAA
GGGAATTCAAGCATCTATGTCACGCAAGGGAAACAGCCAAGACAACGGTATGATGGAATCTTTCTTTGGCATTTTAAAATCCGAAATGTTTTATGGCTAT
GAGAAAACATTTAAATCACTTAACCAATTGGAACAAGTCATTATAGACTATATTGATTACTACAACAATAAACGAATTAAGATAAAACTAAAAGGACTTA
GCCCTGTGCAATACAGAACTAAATCCTTCGGATAA
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 435 bp | 144 aa | 1 | 435 | + | No |
Chemistry : DDE
ORF sequence :
KLYLSPVLDGFNSEIIAFNLSCSPNLEQVQTMLEQAFTEKHYENTILHSDQGWQYQHDSYHRFLENKGIQASMSRKGNSQDNGMMESFFGILKSEMFYGY
EKDATFKSLNQLEQVIIDYIDYYNNKRIKIKLKGLSPVQYRTKSFG
EKDATFKSLNQLEQVIIDYIDYYNNKRIKIKLKGLSPVQYRTKSFG
Blast result :
Comments
This insertion sequence is incomplete. It is 79 % identical to IS861 at the DNA level and 80 % idendical to orf2 to IS861.
References
1] Pan,X.S. and Fisher,L.M.(1996)J. Bacteriol. 178 (14), 4060-4069.