ISLmo19

  • Family IS6
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP068981 ND Listeria monocytogenes
Listeria monocytogenes
Listeria monocytogenes strain B-33043
DNA section
IS Length : 810 bp

Ends


IR Length : 19

IRL : GGTTCTGTTGCAAAGTTTTCTGATAAACTGATTTTAAGGTAAAATGAATG
IRR : GGTTCTGTTGCAAAGTTTTAAATAAAGAATAAAATCCCTTACGGTATCTA

Insertion site


Left flankDirect repeatRight flankDR Length
Ttctatacgatcaacaaatttgaaatgtat0

DNA sequence

GGTTCTGTTGCAAAGTTTTCTGATAAACTGATTTTAAGGTAAAATGAATGGAAAAGATAGCTTGGAGGAATCAAGATGGATCATTTTAAAGGCAAGCAAT
TTCAGAAAGATGTGATTATTGTCGCCGTAGGCTACTACCTTCGGTATAATCTTAGCTATCGTGACGTCCAAGAAATCCTATATGACCGTGGCATTAACGT
TTCTCACACCACCATCTACCGCTGGGTACAGGAATATGGAAAACTACTTTACACTATTTGGAAAAAGAAAAATAAACAATCCTTCTATTCGTGGAAGATG
GATGAGACCTATATTAAAATCAAAGGGAAATGGCACTATCTTTATCGAGCAATCGATGCAGATGGTTTAACCTTGGATATTTGGTTACGTAAAAAACGGG
ACACACAAGCAGCCTATGCTTTTCTTAAGCGGTTAGTGAAGCAGTTTGATGAACCGAAGGTTGTAGTCACAGATAAAGCCCCCTCTATTACAAGTGCCTT
TAAGAAACTAAAAGAATACGGCTTTTATCAAGGGACAGAACATCGTACCATTAAATACCTGAATAATTTGATTGAACAAGACCATCGTCCAGTAAAGAGA
CGCAATAAATTCTATCGAAGTTTACGCACTGCCTCTACCACGATTAAAGGCATGGAAGCCATCCGAGGATTATATAAGAAAACCCGAAAAGAAGGCACTC
TCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCACAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTG
CAACAGAACC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
681 bp226 aa76756+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MDHFKGKQFQKDVIIVAVGYYLRYNLSYRDVQEILYDRGINVSHTTIYRWVQEYGKLLYTIWKKKNKQSFYSWKMDETYIKIKGKWHYLYRAIDADGLTL
DIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLY
KKTRKEGTLFGFSVCTEIKVLLGITA

 

Blast result :
Comments
ISLmo19 is 99% aa similar to IS1216E but only 94% DNA identical.
ISLmo19 was identified by in silico sequence analysis of Listeria monocytogenes plasmids.
References
1] Chmielowska, C. and Bartosik, D. (2021) Direct submission.