ISEc88
- Family IS5
- Group IS903
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
LC602697 | ND | Escherichia coli | Escherichia coli Escherichia coli B8 plasmid pB8_IMP1 Klebsiella aerogenes plasmid pMRY13-134EAE_1 Klebsiella pneumoniae plasmid pMRY13-133KPN_2 Enterobacter cloacae B12 plasmid pB12IMP1 |
DNA section
IS Length : 1048 bp
Ends
IR Length : 15
IRL : GGCTTTGTTGCACAAAGCCAGTCCGCTGAGCTGGTAGCCTCGAGACATGA
IRR : GGCTTTGTTGCACAAGTCGGAAGGCAGACGAGATTACCCCAGCCCCAGAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
cagaagtgatctgcacca | gttcaatat | tgcagccagctcctgaca | 9 |
DNA sequence
GGCTTTGTTGCACAAAGCCAGTCCGCTGAGCTGGTAGCCTCGAGACATGAGTGAACCGAAGGGGTCCAAGGCCCGCTACAAGACCACCAACTGGGCAGAG
TACAACGCCGCGCTCAAAGCCCGAGGGTCGCTGACAATCTGGCTGGACAAAGGCATGCAGTGGTACGCCCCATCCAGCGGCAAACGCGGGCGCCAGCACA
TCTTCTCCAACGCAGCCATCCAGTTCTGTCTGGGCATCAAGTGCCTGTTCGGTCTGGCCCTGCGTCAAAGCCTGGGCATGGTTGAAAGCCTGCTGCGTCT
GGCAGGCCTGGACTGGCGGGTGCCCGACTACAGCACCGTGTGCCGACGCCAGAAGACTTTGCAGGTACAACTGCCCTACCGAGCCAGTACCACCGCACTG
GAACTGCTGGTGGACAGCACCGGCATTCAGTTCCTTGGCGAAGGCGAATGGAAACGCAAGAAGCACGGTGCCGAGTACCGGCGCCAGTGGCGCAAGGTGC
ACCTGGGTATTGATGCCCACACGTTGGAGATCCGGGCCATCGAGGTGACCGACAACAGCGTGGGCGATGCGCCCATGCTGCTCGAGTTGCTGGAGCAGAT
ACCACCCGATGAGCCGATTGCCAGCGTCAGTGGGGACGGTGCCTACGACACCAAGGCGTGCCATGCGGCGATTGCCCAGCGAAATGCGCAGGCGGTGATC
CCCCCGCGCAAGAACGCCCAGACGTGGAAGGCGACCCTGGTGGGAGCGCATGCGCGCAACGAAGCGCTGCGAGCCTGTGACAGATTGGGGCGCAGCATCT
GGAAAAAGTGGAGCGGCTATCACCGCAGAAGTCTGGTGGAGACCAAGATGCACTGCTTCAAACGCCTGGGCCAACGGGTGATGGCGCGCACGTTTGAGCG
GCAGGTGGTGGAGTTGCATGTGCGTGTGGCTCTGCTCAACCGTTTCACGCAACTCGGGCGCCCGAGCACGGTGCCCGTGGGTGCCATGGCATAGCTGCGT
CTGGGGCTGGGGTAATCTCGTCTGCCTTCCGACTTGTGCAACAAAGCC
TACAACGCCGCGCTCAAAGCCCGAGGGTCGCTGACAATCTGGCTGGACAAAGGCATGCAGTGGTACGCCCCATCCAGCGGCAAACGCGGGCGCCAGCACA
TCTTCTCCAACGCAGCCATCCAGTTCTGTCTGGGCATCAAGTGCCTGTTCGGTCTGGCCCTGCGTCAAAGCCTGGGCATGGTTGAAAGCCTGCTGCGTCT
GGCAGGCCTGGACTGGCGGGTGCCCGACTACAGCACCGTGTGCCGACGCCAGAAGACTTTGCAGGTACAACTGCCCTACCGAGCCAGTACCACCGCACTG
GAACTGCTGGTGGACAGCACCGGCATTCAGTTCCTTGGCGAAGGCGAATGGAAACGCAAGAAGCACGGTGCCGAGTACCGGCGCCAGTGGCGCAAGGTGC
ACCTGGGTATTGATGCCCACACGTTGGAGATCCGGGCCATCGAGGTGACCGACAACAGCGTGGGCGATGCGCCCATGCTGCTCGAGTTGCTGGAGCAGAT
ACCACCCGATGAGCCGATTGCCAGCGTCAGTGGGGACGGTGCCTACGACACCAAGGCGTGCCATGCGGCGATTGCCCAGCGAAATGCGCAGGCGGTGATC
CCCCCGCGCAAGAACGCCCAGACGTGGAAGGCGACCCTGGTGGGAGCGCATGCGCGCAACGAAGCGCTGCGAGCCTGTGACAGATTGGGGCGCAGCATCT
GGAAAAAGTGGAGCGGCTATCACCGCAGAAGTCTGGTGGAGACCAAGATGCACTGCTTCAAACGCCTGGGCCAACGGGTGATGGCGCGCACGTTTGAGCG
GCAGGTGGTGGAGTTGCATGTGCGTGTGGCTCTGCTCAACCGTTTCACGCAACTCGGGCGCCCGAGCACGGTGCCCGTGGGTGCCATGGCATAGCTGCGT
CTGGGGCTGGGGTAATCTCGTCTGCCTTCCGACTTGTGCAACAAAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
948 bp | 315 aa | 47 | 994 | + | No |
Chemistry : DDE
ORF sequence :
MSEPKGSKARYKTTNWAEYNAALKARGSLTIWLDKGMQWYAPSSGKRGRQHIFSNAAIQFCLGIKCLFGLALRQSLGMVESLLRLAGLDWRVPDYSTVCR
RQKTLQVQLPYRASTTALELLVDSTGIQFLGEGEWKRKKHGAEYRRQWRKVHLGIDAHTLEIRAIEVTDNSVGDAPMLLELLEQIPPDEPIASVSGDGAY
DTKACHAAIAQRNAQAVIPPRKNAQTWKATLVGAHARNEALRACDRLGRSIWKKWSGYHRRSLVETKMHCFKRLGQRVMARTFERQVVELHVRVALLNRF
TQLGRPSTVPVGAMA
RQKTLQVQLPYRASTTALELLVDSTGIQFLGEGEWKRKKHGAEYRRQWRKVHLGIDAHTLEIRAIEVTDNSVGDAPMLLELLEQIPPDEPIASVSGDGAY
DTKACHAAIAQRNAQAVIPPRKNAQTWKATLVGAHARNEALRACDRLGRSIWKKWSGYHRRSLVETKMHCFKRLGQRVMARTFERQVVELHVRVALLNRF
TQLGRPSTVPVGAMA
Blast result :
Comments
ISEc88 is 92% aa similar to ISAte1.
References
1] Abe,R., Akeda,Y., Sugawara,Y., Yoshida,T., Tomono,K. and Hamada,S.(2021) Direct GenBank submission.