ISAba59

  • Family IS5
  • Group IS903
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Acinetobacter baumannii
Acinetobacter baumannii
Acinetobacter baumannii G20AB0007
Acinetobacter baumannii G20AB0009
Acinetobacter baumannii G20AB0011
Acinetobacter baumannii Ab-C102 plasmid pAb-C102_1
DNA section
IS Length : 1039 bp

Ends


IR Length : 19/22

IRL : GGCTTTGTTGCACAAAGCTGTTCTTAAGGGCTTCTTCAGCAATATAATTT
IRR : GGCTTTGTTGCATAAAGCCTTTGACGGCAGAGTTTTCCTAAGTTGCTAAA

Insertion site


Left flankDirect repeatRight flankDR Length
TTTTTTAGTTCTTGGAGTAAATAACTAAAAAT0

DNA sequence

GGCTTTGTTGCACAAAGCTGTTCTTAAGGGCTTCTTCAGCAATATAATTTTCAAATGAAGAAGCCTACACAAAAAATCTACCGCACAACCAATTGGCCCG
CATATAACCGAGCTCTCATTAATCGTGGGAATATTGCCATTTGGTTCGATCCAAAGACCCAGTGGTATGCACAATCACAAGGCAAGCATGGTCGAAATCA
AACTTACTCTGACACCGCTATTCAATGCTGTTTAATGATCAAATCTTTATTCAGACTCTCTTTACGTATGGTCACAGGTTTTGTTCAAAGTCTGATTAAC
CTTTGCGGATTAAATTGGGCAGCACCAGATTACAGTACGCTTTGTAGAAGACAAAAGCAGATTGATATTCAAATTAGCTATGAGAAGAGTTGTAATGGAC
TGCATCTACTCGTCGATTCCACGGGCTTGAAGTTTTTAGGTGAAGGTGAATGGAAACGTAAGAAACATCAGCCTGAATATCGTCGCCAATGGCGTAAATT
ACATATTGGTATAGATGCTAAAACCCTGCAAATACGCGCTATTCAGCTCACAACCAATAATGTCAGTGATTCACAGGTACTTGGTGATTTACTTAATCAG
ATTCCACAAGATGAGCAGATTGACTCTGTTTATACCGATGGAGCTTATGACACCAAGAAATGCCGTCAGGTCATTGTAGATAGGCAAGCGCATGCGGTGA
TTCCACCTAGAAAAAATGCGAAACCATGGAAAGATACAAAGATCAGCTCGCTAGAGCGAAATGAATTACTTCGAACAGTTAAACGTTTAGGCAGCACACT
ATGGAAAAAATGGTCAGGCTATCATCGGCGAAGTTTGGTTGAAACTAAGATGCATTGCATCAAGTTATTAGGCGATAAACTCAGTGCTAGGAATTTTGAC
AGCCAAGTGAATGAGATCCATGCACGCGTAGCCGTATTAAATAAATTTACAGAATTAGGCAGACCTCATACCCAAGTTGTAACCTAAATTTTAGCAACTT
AGGAAAACTCTGCCGTCAAAGGCTTTATGCAACAAAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
933 bp310 aa55987+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKKPTQKIYRTTNWPAYNRALINRGNIAIWFDPKTQWYAQSQGKHGRNQTYSDTAIQCCLMIKSLFRLSLRMVTGFVQSLINLCGLNWAAPDYSTLCRRQ
KQIDIQISYEKSCNGLHLLVDSTGLKFLGEGEWKRKKHQPEYRRQWRKLHIGIDAKTLQIRAIQLTTNNVSDSQVLGDLLNQIPQDEQIDSVYTDGAYDT
KKCRQVIVDRQAHAVIPPRKNAKPWKDTKISSLERNELLRTVKRLGSTLWKKWSGYHRRSLVETKMHCIKLLGDKLSARNFDSQVNEIHARVAVLNKFTE
LGRPHTQVVT

 

Blast result :
Comments
ISAba59 is 94% aa similar to ISAha1.
References
1] Yoon, E.J. and Jeong, S.H. (2020) Direct submission.