ISRor5
- Family IS5
- Group IS5
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Raoultella ornithinolytica | Raoultella ornithinolytica Citrobacter freundii 18-1 plasmid pBKPC18-1 |
DNA section
IS Length : 1150 bp
Ends
IR Length : 15/16
IRL : GGCAATGCTGATCAAGGTCCACCGTTGTCGCTTCTCAAACGTTATCCGCA
IRR : GGCAATGCTGAACAAGTAACGTCATATCCATCGCACAGCCATTTGAATGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TCGGCAGCAG | TTAA | ATCCATCGGT | 4 |
DNA sequence
GGCAATGCTGATCAAGGTCCACCGTTGTCGCTTCTCAAACGTTATCCGCAGATGAAGCAGCAGACCCTGGCAATGGCCGCAGATCAAAACAACGGATTCG
AGCAGTCGCGCAAGCCCACCCGACGTGAAGAGTTCTTGCGGACCATGGAGACAATAGTGCCTTGGGCCGCCCTGTGCCAGGTGATAGAGCCGCACTACCC
CAAGGCCGGCAACGGCCGCCCGCCCATTGGCCTAGAGCGCATGCTGCGCATCCATTTCCTGCAGCACTGGTTCAACCTGGCCGATCTGGCGTGCGAGGAG
GCTCTGTATGACAGTGCCAGTCTGCGCCGCTTTGCGGGCATTGACCTGGGTCGTGAACGGGTGCCCGATGCCACCACGCTGCTGAAGTTTCGCAAACTGC
TCCATGAGCACAAACTGGGCGAAGCCCTGTTTGCCAAGGTAGGCCAGCAATTGCAGGAGCGCGGCTTGAAGGTCAATACCGGCACCATCGTGGATGCCAC
CATCATCGCCGCGCCCAGTTCTACCAAGAACGCCGACAAGGCGCGCGACCCCGACATGCACCAGACCCGCAAAGGCCAGCAATGGTATTTCGGCATGAAG
CTGCACATTGGGGTGGACAGCCAAAGCGGGCTGGCGCACAGCGCCGTGGTGACGGCGGCCAACGTGCACGACAAACACCCACTGCCCGATCTGCTGCATG
GCAATGAGCGACGCGTGTACGGCGACTCGGCCTATGCCAGCCAGAAAACACTGATAGCGAGCAAAGCCCCCAGGGCCAAGGACTTCACCAACCAGCGCAC
CCGCCGTGCGGGCGAGGTGGACGAAGTTCAGCGGGCCAAGAACCGCAACAAGTCACGGGTGCGCGCTCGGGTCGAGCATGTCTTTGCGGTGGTAAAGCGC
CTGTGGGGATTCACCAAGGTGCGCTATCGCGGGCTGCAAAAGAACGCCACGCGTGCGTTCACGGCCTTGGCGCTGGCCAACATCTACCTTGCCCGAGGGC
GCCTGCAGGGACAGGTGCGCCCGTAAGGGTCCGAAAGGGGCTCAAAGGCTCCCGAAACAGGCCCTGTGGGGCAAAGCACAGTATCTTTGCGGGCCATTTG
GCATTCAAATGGCTGTGCGATGGATATGACGTTACTTGTTCAGCATTGCC
AGCAGTCGCGCAAGCCCACCCGACGTGAAGAGTTCTTGCGGACCATGGAGACAATAGTGCCTTGGGCCGCCCTGTGCCAGGTGATAGAGCCGCACTACCC
CAAGGCCGGCAACGGCCGCCCGCCCATTGGCCTAGAGCGCATGCTGCGCATCCATTTCCTGCAGCACTGGTTCAACCTGGCCGATCTGGCGTGCGAGGAG
GCTCTGTATGACAGTGCCAGTCTGCGCCGCTTTGCGGGCATTGACCTGGGTCGTGAACGGGTGCCCGATGCCACCACGCTGCTGAAGTTTCGCAAACTGC
TCCATGAGCACAAACTGGGCGAAGCCCTGTTTGCCAAGGTAGGCCAGCAATTGCAGGAGCGCGGCTTGAAGGTCAATACCGGCACCATCGTGGATGCCAC
CATCATCGCCGCGCCCAGTTCTACCAAGAACGCCGACAAGGCGCGCGACCCCGACATGCACCAGACCCGCAAAGGCCAGCAATGGTATTTCGGCATGAAG
CTGCACATTGGGGTGGACAGCCAAAGCGGGCTGGCGCACAGCGCCGTGGTGACGGCGGCCAACGTGCACGACAAACACCCACTGCCCGATCTGCTGCATG
GCAATGAGCGACGCGTGTACGGCGACTCGGCCTATGCCAGCCAGAAAACACTGATAGCGAGCAAAGCCCCCAGGGCCAAGGACTTCACCAACCAGCGCAC
CCGCCGTGCGGGCGAGGTGGACGAAGTTCAGCGGGCCAAGAACCGCAACAAGTCACGGGTGCGCGCTCGGGTCGAGCATGTCTTTGCGGTGGTAAAGCGC
CTGTGGGGATTCACCAAGGTGCGCTATCGCGGGCTGCAAAAGAACGCCACGCGTGCGTTCACGGCCTTGGCGCTGGCCAACATCTACCTTGCCCGAGGGC
GCCTGCAGGGACAGGTGCGCCCGTAAGGGTCCGAAAGGGGCTCAAAGGCTCCCGAAACAGGCCCTGTGGGGCAAAGCACAGTATCTTTGCGGGCCATTTG
GCATTCAAATGGCTGTGCGATGGATATGACGTTACTTGTTCAGCATTGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
975 bp | 324 aa | 52 | 1026 | + | No |
Chemistry : DDE
ORF sequence :
MKQQTLAMAADQNNGFEQSRKPTRREEFLRTMETIVPWAALCQVIEPHYPKAGNGRPPIGLERMLRIHFLQHWFNLADLACEEALYDSASLRRFAGIDLG
RERVPDATTLLKFRKLLHEHKLGEALFAKVGQQLQERGLKVNTGTIVDATIIAAPSSTKNADKARDPDMHQTRKGQQWYFGMKLHIGVDSQSGLAHSAVV
TAANVHDKHPLPDLLHGNERRVYGDSAYASQKTLIASKAPRAKDFTNQRTRRAGEVDEVQRAKNRNKSRVRARVEHVFAVVKRLWGFTKVRYRGLQKNAT
RAFTALALANIYLARGRLQGQVRP
RERVPDATTLLKFRKLLHEHKLGEALFAKVGQQLQERGLKVNTGTIVDATIIAAPSSTKNADKARDPDMHQTRKGQQWYFGMKLHIGVDSQSGLAHSAVV
TAANVHDKHPLPDLLHGNERRVYGDSAYASQKTLIASKAPRAKDFTNQRTRRAGEVDEVQRAKNRNKSRVRARVEHVFAVVKRLWGFTKVRYRGLQKNAT
RAFTALALANIYLARGRLQGQVRP
Blast result :
Comments
ISRor5 is 89% aa similar to IS881.
References
1] Ting Yu (2020) Direct submission.
2] Zheng,B. (2017) Direct GenBank submission.
2] Zheng,B. (2017) Direct GenBank submission.