ISEfa17
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP019993 | ND | Enterococcus faecium | Enterococcus faecium Enterococcus faecium 2014-VREF-268 plasmid p268-1 |
DNA section
IS Length : 1493 bp
Ends
IR Length : 20/27
IRL : GGCTCTATAATTTCTAGGACTGATAGAAAATCATTCTATCGGTCCCTTTT
IRR : GGCTCTTTGTCAAATAGGACTGATAGAGTGAGATAAGAACATCTAAGGTA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ACCTAATATTACGGTGA | GGAATTG/TT | TTTCTACCGACATAAACAA | 7 |
DNA sequence
GGCTCTATAATTTCTAGGACTGATAGAAAATCATTCTATCGGTCCCTTTTGAGCATGAAAAAACAAAACATACAGAAGCTCCGTTAGAATTGAATCACCA
CAACACAATCAAAGGAGCGTTCTGTATGCCTGATCTTCATCATATCAAACTACTACTTGGAATCAAAGATAAAAACATTTTCATCACAAATGTGGAATCG
AAGAGCATTAAGAATATCAAGAGTCTTGTTGTTTCTGCGACGTTAAGTAAAGAAATTCGTCGCTGTCCTTTGTGTAAACAGATGAATCATGAAGGCATGA
TCGTTAAGAACGGAAAGAAAAAATCGCTCATTCAACTTAATAAATGTGCGAACCAACTGACTTATCTTGCTTTAGCGAAACAACGCTACCACTGTCGTGG
CTGCCACACCTATTTTACGGCGAATACCTACATTGTCGATAGAAACTGCTTTATCGCTAAACAAGTGCGCTATAAAATTTTAGAAGAGCTAACTGAAAAA
CAAGCAATGACGACAATTGCTAAGCATTGCGGCGTTTCTTGGTCGACCGTTTCTCGGACACTCGCTTCTCTGATCCCCATGACAAAAGTAAAAAGAAATT
GGTTACCGCGTTGTTTATTAATGGATGAATTTCGTTCACTGAAAAATCAAGTCGGTCCCTACTCCTTTTCTTGTATGGATGGCGATACTGGAAAATTACT
GGATATTCTTCCTTCACGGAAGAAAAAGGCTCTCGTTTCTTATTTTATGCAATTTGAACGACGCGCACGATTGAAGGTAAAGGTCATCGTGACGGACATG
AATGTTTCTTATGCCTCTCTGATAAAGGAATGTTTTCCAAAGGCAAAACTCGTTGTGGATCGTTTTCACATTGTCAAACATCTCATTCGTAAATTTGAGG
ATATTCGCGTACGAATCATGAAAAGCTTTGATCGAAACGATCCAACACAAGCCAAATATTATCGACAATTAAAGGCGTTGTCTCGGCTTCTGATCAAACG
ACAGGACAAGCTTGTTTATGACAAATGGACCAAATGGCGCAATTTTGGTTGGGCGTATCTCACCGAAAGTGAAGTGGTGGATCGTCTGCTTTCGATCTCT
GACGAATTACGAATCGCCTATTTTTACTATCAAGAAATTCTTCAAGCGTTTCACGACAAAGAGGCGGACACTTTCTTTAAACTTGTAAGAACGATGCCCA
ATTCCGTTCCAAAAGAACTGCATTCTATAAAAAAAGCTTTTATAAACTATGAATCCGGCATTCGTTTAGCCCTCGAATTGCCTTATTCAAATGCCAAAAT
AGAAAATCTGCATACCCACATCAAAGCATTGAAACGAGTCGCTTATGGCTTTCGAAGCTTTCGGAAAATGAAGACCAGAATTTTCTTACTAAATAATCTG
ATTACCTATGAATCAAAAAACATCTAAAGTAGAAAAGGAATTCTACCTTAGATGTTCTTATCTCACTCTATCAGTCCTATTTGACAAAGAGCC
CAACACAATCAAAGGAGCGTTCTGTATGCCTGATCTTCATCATATCAAACTACTACTTGGAATCAAAGATAAAAACATTTTCATCACAAATGTGGAATCG
AAGAGCATTAAGAATATCAAGAGTCTTGTTGTTTCTGCGACGTTAAGTAAAGAAATTCGTCGCTGTCCTTTGTGTAAACAGATGAATCATGAAGGCATGA
TCGTTAAGAACGGAAAGAAAAAATCGCTCATTCAACTTAATAAATGTGCGAACCAACTGACTTATCTTGCTTTAGCGAAACAACGCTACCACTGTCGTGG
CTGCCACACCTATTTTACGGCGAATACCTACATTGTCGATAGAAACTGCTTTATCGCTAAACAAGTGCGCTATAAAATTTTAGAAGAGCTAACTGAAAAA
CAAGCAATGACGACAATTGCTAAGCATTGCGGCGTTTCTTGGTCGACCGTTTCTCGGACACTCGCTTCTCTGATCCCCATGACAAAAGTAAAAAGAAATT
GGTTACCGCGTTGTTTATTAATGGATGAATTTCGTTCACTGAAAAATCAAGTCGGTCCCTACTCCTTTTCTTGTATGGATGGCGATACTGGAAAATTACT
GGATATTCTTCCTTCACGGAAGAAAAAGGCTCTCGTTTCTTATTTTATGCAATTTGAACGACGCGCACGATTGAAGGTAAAGGTCATCGTGACGGACATG
AATGTTTCTTATGCCTCTCTGATAAAGGAATGTTTTCCAAAGGCAAAACTCGTTGTGGATCGTTTTCACATTGTCAAACATCTCATTCGTAAATTTGAGG
ATATTCGCGTACGAATCATGAAAAGCTTTGATCGAAACGATCCAACACAAGCCAAATATTATCGACAATTAAAGGCGTTGTCTCGGCTTCTGATCAAACG
ACAGGACAAGCTTGTTTATGACAAATGGACCAAATGGCGCAATTTTGGTTGGGCGTATCTCACCGAAAGTGAAGTGGTGGATCGTCTGCTTTCGATCTCT
GACGAATTACGAATCGCCTATTTTTACTATCAAGAAATTCTTCAAGCGTTTCACGACAAAGAGGCGGACACTTTCTTTAAACTTGTAAGAACGATGCCCA
ATTCCGTTCCAAAAGAACTGCATTCTATAAAAAAAGCTTTTATAAACTATGAATCCGGCATTCGTTTAGCCCTCGAATTGCCTTATTCAAATGCCAAAAT
AGAAAATCTGCATACCCACATCAAAGCATTGAAACGAGTCGCTTATGGCTTTCGAAGCTTTCGGAAAATGAAGACCAGAATTTTCTTACTAAATAATCTG
ATTACCTATGAATCAAAAAACATCTAAAGTAGAAAAGGAATTCTACCTTAGATGTTCTTATCTCACTCTATCAGTCCTATTTGACAAAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1302 bp | 433 aa | 126 | 1427 | + | No |
Chemistry : Unknow
ORF sequence :
MPDLHHIKLLLGIKDKNIFITNVESKSIKNIKSLVVSATLSKEIRRCPLCKQMNHEGMIVKNGKKKSLIQLNKCANQLTYLALAKQRYHCRGCHTYFTAN
TYIVDRNCFIAKQVRYKILEELTEKQAMTTIAKHCGVSWSTVSRTLASLIPMTKVKRNWLPRCLLMDEFRSLKNQVGPYSFSCMDGDTGKLLDILPSRKK
KALVSYFMQFERRARLKVKVIVTDMNVSYASLIKECFPKAKLVVDRFHIVKHLIRKFEDIRVRIMKSFDRNDPTQAKYYRQLKALSRLLIKRQDKLVYDK
WTKWRNFGWAYLTESEVVDRLLSISDELRIAYFYYQEILQAFHDKEADTFFKLVRTMPNSVPKELHSIKKAFINYESGIRLALELPYSNAKIENLHTHIK
ALKRVAYGFRSFRKMKTRIFLLNNLITYESKNI
TYIVDRNCFIAKQVRYKILEELTEKQAMTTIAKHCGVSWSTVSRTLASLIPMTKVKRNWLPRCLLMDEFRSLKNQVGPYSFSCMDGDTGKLLDILPSRKK
KALVSYFMQFERRARLKVKVIVTDMNVSYASLIKECFPKAKLVVDRFHIVKHLIRKFEDIRVRIMKSFDRNDPTQAKYYRQLKALSRLLIKRQDKLVYDK
WTKWRNFGWAYLTESEVVDRLLSISDELRIAYFYYQEILQAFHDKEADTFFKLVRTMPNSVPKELHSIKKAFINYESGIRLALELPYSNAKIENLHTHIK
ALKRVAYGFRSFRKMKTRIFLLNNLITYESKNI
Blast result :
Comments
ISEfa17 is 60% aa similar to ISEfa11.
References
1] Moutusee ISlam (2020) Direct submission.
2] Kim,H.M. (2017) Direct GenBank submission.
2] Kim,H.M. (2017) Direct GenBank submission.