ISAba50

  • Family IS256
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KT852971 ND Acinetobacter baumannii
Acinetobacter baumannii 255_n plasmid p255n_1
DNA section
IS Length : 1314 bp

Ends


IR Length : 21/25

IRL : GAGACTGTAAATAAAACTGTGTAAACGCTTAGACTATCCCTCAACGCTGT
IRR : GAGGGTGTAAATAATTCTGTGTAAATACAGTTTTAAAAATACTTGGTTAC

Insertion site


Left flankDirect repeatRight flankDR Length
ATCAAGTTGTTGGTTATTTTCATCTTCTAGCATTA8

DNA sequence

GAGACTGTAAATAAAACTGTGTAAACGCTTAGACTATCCCTCAACGCTGTTAGGGGCAACACAGGTGTTTACCATGAAAGATGAAGCAATGCTGGCATTA
GCCAAAGAATTTGCCAAGAACTTAAAGACAGAAGCTGACCTGAATAATTTCAGTAAAGCTCTAAAGAAATTAACGGTGGAAACTATTCTAAATGCTGAAC
TCACTGACCATTTAGGTTATGAGAAGCATAGTCCTAGAGTAGGTAAAAATGCTCGTAATGGCTATACAACTAAACGCCTACTGACTGATGATGGTGAGTT
TGAGCTAGACACGCCTAGAGATCGTGATGGTACATTTGAGCCTCAGTTCATCAAGAAAAGTCAAACTCGAATCACGCAAATGGATAGTCAAATTCTATCC
CTTTATGCTAAAGGCATGACGACACGAGATATCGTTGCCACGTTCAAGGAAATGTACGATGCAGATGTCTCTGCTACCTTAATTTCCAAGGTGACAGATG
CTGTGATCGACCAAGTCACTCAATGGCAAAACCGCCCTTTGGATGCATTCTATCCAATCGTTTACCTAGACTGTATTGTCGTGAAGGTGCGACATAACAA
CACCGTCATCAACAAGGCTGTATTTCTTGCTTTGGGTGTCAATACAGAGGGGCAGAAAGACTTACTTGGACTGTGGATGGCTGAAAACGAAGGGGCGAAG
TTCTGGTTATCAGTTCTCACCGAACTGAAGAATCGTGGCTTGCAAGATATTCTGATTGCATGTGTGGATGGATTAAAAGGCTTTCCTGATGCGATTAATA
CGGTCTATCCTGATACCCATATCCAGTTGTGTATTATCCATATGGTACGCAATAGCTTGAAGTATGTCAGTTGGAAAGATTATAAGGCCGTTACATCTGA
TTTGAAGAAAATCTACCAGTCGGTAACCGAAGATGAAGCCTTACACGCTCTTGATGAATTTGGTCAGAAATGGGATGACAAATACCCTCAAATCAGCAAA
TCATGGCTCGGGCATTGGCCGAATCTCAACACGTTCTTTGCTTATCCTATGGATATTCGTAAAGCAATCTACACAACGAATGCGATTGAATCATTGAACA
GCGTGATCCGTCATGCGACCAAGAAAAGAAAAATCTTCCCGACTGATGATTCAGTGAAAAAAGTGGTATATTTAGCGATTATGGCAGCAAGCAAAAAATG
GACAATGCCTATCCAAAATTGGAAATCTGCTATGAACCGCTTTAGTATCATGTTTGAAGAGCGTGTAACCAAGTATTTTTAAAACTGTATTTACACAGAA
TTATTTACACCCTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1209 bp402 aa741282+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKDEAMLALAKEFAKNLKTEADLNNFSKALKKLTVETILNAELTDHLGYEKHSPRVGKNARNGYTTKRLLTDDGEFELDTPRDRDGTFEPQFIKKSQTRI
TQMDSQILSLYAKGMTTRDIVATFKEMYDADVSATLISKVTDAVIDQVTQWQNRPLDAFYPIVYLDCIVVKVRHNNTVINKAVFLALGVNTEGQKDLLGL
WMAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINTVYPDTHIQLCIIHMVRNSLKYVSWKDYKAVTSDLKKIYQSVTEDEALHALDEFGQKW
DDKYPQISKSWLGHWPNLNTFFAYPMDIRKAIYTTNAIESLNSVIRHATKKRKIFPTDDSVKKVVYLAIMAASKKWTMPIQNWKSAMNRFSIMFEERVTK
YF

 

Blast result :
Comments
ISAba50 is 88% aa similar to ISAbe10.
References
1] ISfinder annotation (2019)