ISEnfa110

  • Family IS110
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
AF173641 ND Enterococcus faecalis
Enterococcus faecalis TUH4-67
DNA section
IS Length : 1611 bp

Ends


Left end : CTATTACAATAAATTTGGACAGGAAAGCCGGACAGCCAGTCCGGCTTTCCCTCCATCTCGTGCCTAAGCTACAATGAGAGGAGCAACTGGCTGACCAATC
Right end : CCGCCGTTTTAATTTTGAGATGCTCAGCGGCTTGATTTTGTATTGCATTTTTTCGCCTCCCTAAAAATCTGAAATTTCTACTTGACTTTTATTAGCAGGT

Insertion site


Left flankDirect repeatRight flankDR Length
TTGTTCGCTCCTTTCACTGT0

DNA sequence

CTATTACAATAAATTTGGACAGGAAAGCCGGACAGCCAGTCCGGCTTTCCCTCCATCTCGTGCCTAAGCTACAATGAGAGGAGCAACTGGCTGACCAATC
ACTCCTTGGGCTTGTATGTCCGTGTGAAAGACTGTTAGCCATCCTCTCGTTGCAGCGTTCGATTTAAGCAGGTTGAACCACCGGATGTCGGAGAGTTCGT
GTCACACAATAGATTGAATCGGCAGCGAGAAAAGATGGATTCCGGTTGCAGATTCTTTGTATTGGAGGAATGTGAATGAACTGCGTTGGCATCGATGTTT
CCAAGGGTAAGAGCATGATTGCAGTCATGCGGCCCTTCGGAGAGGTAGTGGTTTCACCCTTTGAAGTACGTCACACCGCCAATGAACTGAGCGAGCTGGC
AGGACTGCTCAAAAGCCTGGACGGCGAGACCCGTGTGGTGATGGAATCCACGGGTAATTACCATGCTCCGGTGGCCTGGCTGCTCCACGACGCGGGCCTT
TATGTCTCGGTAGTCAATGCAATGCTGGTGCATGACTACGGAAACAACAGTTTAAGACGGGCCAAAACCGACAAAAAGGATGCCGTAAAGCTGGCCAACT
ACGGTCTTGACCACTGGCTCACATTGCCGAGATATATCCCGGAGGAGGATACCCGACTCATGCTGAAAATCTGCTACCGGCAGTACCAACAGTATTCCAA
AGTTCAGACCATGCTGAAGAATAACCTGATCTCCCTGCTGGACACCACCTTCCCAGACGCAAATCGCTTGTTTACCAGTCCGCCCCGCGCCGATGGCAGC
GAGAAGTGGGTGGACTTTGTCGCTACTTTTTGGCATTGCGAGTGCGTTTGTGGCCGGTCTGAGAAGGCCTTTACTACCCAATACCAGAAGTGGTGCAGAA
AGCACGGCTACAATTTCAGCGAGGATAAGGCGCTGGATATTTATGCCTCTGCTTGCAGACACTTCGGTGTCATACCGAAAACGGATACGGCAAAACTTTT
GGTAGAACAGGCCATTTCTCAACTCCAGACAACTTCTTCCGCGTTAGCTGCTCTCAAACAGGAGATGCAATCCCTGGCAGCTTCTCTGCCGGAGTATCCT
GTAGTGATGGGGATGTTTGGTGTTGGCCCAACCCTCGGCCCTCAACTCCTGGCTGAAATTGGCGATGTACGCCGTTTTCATTCCAAAAAAGCGTTGGTTG
CCTTTGCGGGTATTGACGCCCCGCCCTACCAATCCGGTCAAATAGATGTCCGTAGCCGTAGCATTTCCAAGCGAGGATCTGCCTCACTGCGCAGGACGCT
CTTTCTGGTGATGAGCGTCATCCTGCAATGTGCTCCAATAGACGAGCCGGTGTACCAGTTCATGGACAAGAAACGCTCTGAAGGCAAGCCATATCGTGTC
TACATGATGGCCTCTGCCAACAAGTTCCTGCGCATCTACTACGCTTCTGTGAAAGCCTACTTGGAATCCCTGGAGCACGACTGATTTTTACACTCTATAC
CATCTGGCTGGCCGCCGTTTTAATTTTGAGATGCTCAGCGGCTTGATTTTGTATTGCATTTTTTCGCCTCCCTAAAAATCTGAAATTTCTACTTGACTTT
TATTAGCAGGT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1209 bp402 aa2761484+No
ORF function : Transposase
Chemistry : DEDD

ORF sequence :

MNCVGIDVSKGKSMIAVMRPFGEVVVSPFEVRHTANELSELAGLLKSLDGETRVVMESTGNYHAPVAWLLHDAGLYVSVVNAMLVHDYGNNSLRRAKTDK
KDAVKLANYGLDHWLTLPRYIPEEDTRLMLKICYRQYQQYSKVQTMLKNNLISLLDTTFPDANRLFTSPPRADGSEKWVDFVATFWHCECVCGRSEKAFT
TQYQKWCRKHGYNFSEDKALDIYASACRHFGVIPKTDTAKLLVEQAISQLQTTSSALAALKQEMQSLAASLPEYPVVMGMFGVGPTLGPQLLAEIGDVRR
FHSKKALVAFAGIDAPPYQSGQIDVRSRSISKRGSASLRRTLFLVMSVILQCAPIDEPVYQFMDKKRSEGKPYRVYMMASANKFLRIYYASVKAYLESLE
HD

 

Blast result :
Comments
Occurence: Only one copy of this IS element was found in one of 197 enterococci screened.
References
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