ISEnfa110
- Family IS110
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
AF173641 | ND | Enterococcus faecalis | Enterococcus faecalis TUH4-67 |
DNA section
IS Length : 1611 bp
Ends
Left end : CTATTACAATAAATTTGGACAGGAAAGCCGGACAGCCAGTCCGGCTTTCCCTCCATCTCGTGCCTAAGCTACAATGAGAGGAGCAACTGGCTGACCAATC
Right end : CCGCCGTTTTAATTTTGAGATGCTCAGCGGCTTGATTTTGTATTGCATTTTTTCGCCTCCCTAAAAATCTGAAATTTCTACTTGACTTTTATTAGCAGGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TTGTTCGCTC | CTTTCACTGT | 0 |
DNA sequence
CTATTACAATAAATTTGGACAGGAAAGCCGGACAGCCAGTCCGGCTTTCCCTCCATCTCGTGCCTAAGCTACAATGAGAGGAGCAACTGGCTGACCAATC
ACTCCTTGGGCTTGTATGTCCGTGTGAAAGACTGTTAGCCATCCTCTCGTTGCAGCGTTCGATTTAAGCAGGTTGAACCACCGGATGTCGGAGAGTTCGT
GTCACACAATAGATTGAATCGGCAGCGAGAAAAGATGGATTCCGGTTGCAGATTCTTTGTATTGGAGGAATGTGAATGAACTGCGTTGGCATCGATGTTT
CCAAGGGTAAGAGCATGATTGCAGTCATGCGGCCCTTCGGAGAGGTAGTGGTTTCACCCTTTGAAGTACGTCACACCGCCAATGAACTGAGCGAGCTGGC
AGGACTGCTCAAAAGCCTGGACGGCGAGACCCGTGTGGTGATGGAATCCACGGGTAATTACCATGCTCCGGTGGCCTGGCTGCTCCACGACGCGGGCCTT
TATGTCTCGGTAGTCAATGCAATGCTGGTGCATGACTACGGAAACAACAGTTTAAGACGGGCCAAAACCGACAAAAAGGATGCCGTAAAGCTGGCCAACT
ACGGTCTTGACCACTGGCTCACATTGCCGAGATATATCCCGGAGGAGGATACCCGACTCATGCTGAAAATCTGCTACCGGCAGTACCAACAGTATTCCAA
AGTTCAGACCATGCTGAAGAATAACCTGATCTCCCTGCTGGACACCACCTTCCCAGACGCAAATCGCTTGTTTACCAGTCCGCCCCGCGCCGATGGCAGC
GAGAAGTGGGTGGACTTTGTCGCTACTTTTTGGCATTGCGAGTGCGTTTGTGGCCGGTCTGAGAAGGCCTTTACTACCCAATACCAGAAGTGGTGCAGAA
AGCACGGCTACAATTTCAGCGAGGATAAGGCGCTGGATATTTATGCCTCTGCTTGCAGACACTTCGGTGTCATACCGAAAACGGATACGGCAAAACTTTT
GGTAGAACAGGCCATTTCTCAACTCCAGACAACTTCTTCCGCGTTAGCTGCTCTCAAACAGGAGATGCAATCCCTGGCAGCTTCTCTGCCGGAGTATCCT
GTAGTGATGGGGATGTTTGGTGTTGGCCCAACCCTCGGCCCTCAACTCCTGGCTGAAATTGGCGATGTACGCCGTTTTCATTCCAAAAAAGCGTTGGTTG
CCTTTGCGGGTATTGACGCCCCGCCCTACCAATCCGGTCAAATAGATGTCCGTAGCCGTAGCATTTCCAAGCGAGGATCTGCCTCACTGCGCAGGACGCT
CTTTCTGGTGATGAGCGTCATCCTGCAATGTGCTCCAATAGACGAGCCGGTGTACCAGTTCATGGACAAGAAACGCTCTGAAGGCAAGCCATATCGTGTC
TACATGATGGCCTCTGCCAACAAGTTCCTGCGCATCTACTACGCTTCTGTGAAAGCCTACTTGGAATCCCTGGAGCACGACTGATTTTTACACTCTATAC
CATCTGGCTGGCCGCCGTTTTAATTTTGAGATGCTCAGCGGCTTGATTTTGTATTGCATTTTTTCGCCTCCCTAAAAATCTGAAATTTCTACTTGACTTT
TATTAGCAGGT
ACTCCTTGGGCTTGTATGTCCGTGTGAAAGACTGTTAGCCATCCTCTCGTTGCAGCGTTCGATTTAAGCAGGTTGAACCACCGGATGTCGGAGAGTTCGT
GTCACACAATAGATTGAATCGGCAGCGAGAAAAGATGGATTCCGGTTGCAGATTCTTTGTATTGGAGGAATGTGAATGAACTGCGTTGGCATCGATGTTT
CCAAGGGTAAGAGCATGATTGCAGTCATGCGGCCCTTCGGAGAGGTAGTGGTTTCACCCTTTGAAGTACGTCACACCGCCAATGAACTGAGCGAGCTGGC
AGGACTGCTCAAAAGCCTGGACGGCGAGACCCGTGTGGTGATGGAATCCACGGGTAATTACCATGCTCCGGTGGCCTGGCTGCTCCACGACGCGGGCCTT
TATGTCTCGGTAGTCAATGCAATGCTGGTGCATGACTACGGAAACAACAGTTTAAGACGGGCCAAAACCGACAAAAAGGATGCCGTAAAGCTGGCCAACT
ACGGTCTTGACCACTGGCTCACATTGCCGAGATATATCCCGGAGGAGGATACCCGACTCATGCTGAAAATCTGCTACCGGCAGTACCAACAGTATTCCAA
AGTTCAGACCATGCTGAAGAATAACCTGATCTCCCTGCTGGACACCACCTTCCCAGACGCAAATCGCTTGTTTACCAGTCCGCCCCGCGCCGATGGCAGC
GAGAAGTGGGTGGACTTTGTCGCTACTTTTTGGCATTGCGAGTGCGTTTGTGGCCGGTCTGAGAAGGCCTTTACTACCCAATACCAGAAGTGGTGCAGAA
AGCACGGCTACAATTTCAGCGAGGATAAGGCGCTGGATATTTATGCCTCTGCTTGCAGACACTTCGGTGTCATACCGAAAACGGATACGGCAAAACTTTT
GGTAGAACAGGCCATTTCTCAACTCCAGACAACTTCTTCCGCGTTAGCTGCTCTCAAACAGGAGATGCAATCCCTGGCAGCTTCTCTGCCGGAGTATCCT
GTAGTGATGGGGATGTTTGGTGTTGGCCCAACCCTCGGCCCTCAACTCCTGGCTGAAATTGGCGATGTACGCCGTTTTCATTCCAAAAAAGCGTTGGTTG
CCTTTGCGGGTATTGACGCCCCGCCCTACCAATCCGGTCAAATAGATGTCCGTAGCCGTAGCATTTCCAAGCGAGGATCTGCCTCACTGCGCAGGACGCT
CTTTCTGGTGATGAGCGTCATCCTGCAATGTGCTCCAATAGACGAGCCGGTGTACCAGTTCATGGACAAGAAACGCTCTGAAGGCAAGCCATATCGTGTC
TACATGATGGCCTCTGCCAACAAGTTCCTGCGCATCTACTACGCTTCTGTGAAAGCCTACTTGGAATCCCTGGAGCACGACTGATTTTTACACTCTATAC
CATCTGGCTGGCCGCCGTTTTAATTTTGAGATGCTCAGCGGCTTGATTTTGTATTGCATTTTTTCGCCTCCCTAAAAATCTGAAATTTCTACTTGACTTT
TATTAGCAGGT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1209 bp | 402 aa | 276 | 1484 | + | No |
Chemistry : DEDD
ORF sequence :
MNCVGIDVSKGKSMIAVMRPFGEVVVSPFEVRHTANELSELAGLLKSLDGETRVVMESTGNYHAPVAWLLHDAGLYVSVVNAMLVHDYGNNSLRRAKTDK
KDAVKLANYGLDHWLTLPRYIPEEDTRLMLKICYRQYQQYSKVQTMLKNNLISLLDTTFPDANRLFTSPPRADGSEKWVDFVATFWHCECVCGRSEKAFT
TQYQKWCRKHGYNFSEDKALDIYASACRHFGVIPKTDTAKLLVEQAISQLQTTSSALAALKQEMQSLAASLPEYPVVMGMFGVGPTLGPQLLAEIGDVRR
FHSKKALVAFAGIDAPPYQSGQIDVRSRSISKRGSASLRRTLFLVMSVILQCAPIDEPVYQFMDKKRSEGKPYRVYMMASANKFLRIYYASVKAYLESLE
HD
KDAVKLANYGLDHWLTLPRYIPEEDTRLMLKICYRQYQQYSKVQTMLKNNLISLLDTTFPDANRLFTSPPRADGSEKWVDFVATFWHCECVCGRSEKAFT
TQYQKWCRKHGYNFSEDKALDIYASACRHFGVIPKTDTAKLLVEQAISQLQTTSSALAALKQEMQSLAASLPEYPVVMGMFGVGPTLGPQLLAEIGDVRR
FHSKKALVAFAGIDAPPYQSGQIDVRSRSISKRGSASLRRTLFLVMSVILQCAPIDEPVYQFMDKKRSEGKPYRVYMMASANKFLRIYYASVKAYLESLE
HD
Blast result :
Comments
Occurence: Only one copy of this IS element was found in one of 197 enterococci screened.
References
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