ISArsp11

  • Family ISAs1
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
MH067976 ND Arthrobacter sp.
Arthrobacter sp.
Arthrobacter sp. ANT_H58 pA58H1
DNA section
IS Length : 1306 bp

Ends


IR Length : 18/19

IRL : CAGGGCTGATGCAaagtcgtgaatgactgcccccgaacaattctcccgac
IRR : cagggctaatgcaaagtcgctgacggggtcctgaacccgatgcgttccag

Insertion site


Left flankDirect repeatRight flankDR Length
GGCACCACCGGGAACAGCACCGGCGTTCAC10

DNA sequence

CAGGGCTGATGCAAAGTCGTGAATGACTGCCCCCGAACAATTCTCCCGACACTGCCTGTCGGTCCTTTTAATGACGAAAAACTCCTGTTAAAACTGGTGA
TTGTCTAGATCATCGTTCCAACAGGAGTTCTTCCATGCCATCTTCCCCCATCAGCATCCTCCATGGCCAACTGGAAGACATCCCCAAAGACCTCCACTGC
TTCGTGACACCGGAATCGATCTTCCAGGCACTCGCCTCGTTCCCCGACCACCGCAAACGCCGCGGCATCCGCCACCAACTGGGCTGGATCCTGGCCGTGG
CCCTCTGCGCGGTACTGGCTGGCGCAAGATCCTTCGCCGCCATCGCAGACTGGTCAACATACGCCGCCTCCACCTCGCTACGCACCACCGGATTCACGGC
ACCGCACGTCACCACCTTCCAACGCGTCCTCGCCTGCCTGGATGCCGAAGCCTTTGACCAAGCCCTGGGCACGTGGATGCAAACCCAGGTCGACGCCCGA
ATCATCGCCATCGACGGCAAAGAAGTACGTGGAGCCAAAAACGGTGGCGCGGACCGCGTGCACCTCATGGCAGCGTTGGACCACGAGTCCTGCGTCGTGA
TCGGGCAGGTCGACGTAGGCATTAAGACCAACGAGATCACCCGACTCGATTCGCTCCTGGAAACCCTCGGGGACTTGGATGGCAAGATCATCACCATTGA
CGCCTTGCATACGTTGGGTCGCCATGCGGAGTTCCTGCACGCACGAGGCGCCCATTTTCTGATGACGGTGAAAGGCAACCAACCCAAGCTGCTCAAGCAA
CTCCAAGCTTTGCCCTGGAATGAAGTCCCACAAGGTAACCAGCAGCAAGATACCGGGCACGGGCGCAGGAGCATCCGCAGGATCAAGGTCGCCACGCTCA
CCGGCGGAATCAAGTTCCCCCACGCTCTGCAGGCAGCCCAGCTGACCCGAAAAACACGGCCACTGAAGGGAAAGAAGTGGTCCGTCGAGGTCGTATATCT
GATCACCTCGTTGCCGGCCCATCAGGCAAGCCCGCGGCAACTGAACACCTGGATCCGGGGCCACTGGAAAATAGAAAATTCCCTGCATTGGTGCCGGGAC
GTCACGTTCCAGGAGGACGCGAGCCAGACCAGAACGGGTGTCGCGCCGCGGGTGATGGCGAGCCTGCGAAACTTGGCCCTCAGCCTGCATCGACTCAACC
ACAGCACCAACATCGCCAAGACCAACCGCTATATGGCCAAACACCCCGGACGGCCGCTGGAACGCATCGGGTTCAGGACCCCGTCAGCGACTTTGCATTA
GCCCTG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1167 bp388 aa1351301+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MPSSPISILHGQLEDIPKDLHCFVTPESIFQALASFPDHRKRRGIRHQLGWILAVALCAVLAGARSFAAIADWSTYAASTSLRTTGFTAPHVTTFQRVLA
CLDAEAFDQALGTWMQTQVDARIIAIDGKEVRGAKNGGADRVHLMAALDHESCVVIGQVDVGIKTNEITRLDSLLETLGDLDGKIITIDALHTLGRHAEF
LHARGAHFLMTVKGNQPKLLKQLQALPWNEVPQGNQQQDTGHGRRSIRRIKVATLTGGIKFPHALQAAQLTRKTRPLKGKKWSVEVVYLITSLPAHQASP
RQLNTWIRGHWKIENSLHWCRDVTFQEDASQTRTGVAPRVMASLRNLALSLHRLNHSTNIAKTNRYMAKHPGRPLERIGFRTPSATLH

 

Blast result :
Comments
ISArsp11 is 56% aa similar to ISBli27.
References
1] Romaniuk, K. (2018) Direct submission.