ISArsp7

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
MH067973 ND Arthrobacter sp.
Arthrobacter sp. ANT_H48B pA48BH1
Arthrobacter sp. ANT_H44B pA44BH1
DNA section
IS Length : 1451 bp

Ends


IR Length : 22/24

IRL : GGCTCTTCGCGGTTGGTGGTGAATCCGGGGTTCGTGTCGTAGCAAGTTAG
IRR : GGCTCTTCGCGTTTCGTGGTGAATACCAGCCCGCTGAGATGAATTCATGC

Insertion site


Left flankDirect repeatRight flankDR Length
CGCGCAGCTTGCCCTTTGCCTTGGCAACAGC8

DNA sequence

GGCTCTTCGCGGTTGGTGGTGAATCCGGGGTTCGTGTCGTAGCAAGTTAGGGGCCCGTGGCCCTGTTGAGATGGATGTGTCTAAGCATTCTTCTCAGGTC
AGGAACCACGAGCCTTGAATCAGCCTACCCAGTCGTGCCCGAATGCGGCCACGACACTCTTCAATCTCCCCGATTACCGGGTCATCTCTGTCATCAATGA
CGACGACGCCGGCATCCGTGTCGTGACCGTCGCTGCGGACTTCCCGCAAGCCTGCCCCGCCTGTGCCGTCCTGTCGGTGCGCGTGCATTCGCGCCGTATC
CAGCGGGTCCGGGACATCCTTGTCGCTGGCCCGGTCAGGCTTCTGTGGGCCAAGCGACGGTTCTTTTGCGACGAGGCTGCCTGCGTCCGGAAGACCTTTG
CTGAAGCGACCCCACAGGTGCCGCGCTTCGCCCGTTCCACCGTACGGTTGAAGGAAACCCTCATGGATGCCGTCATCAGCTCCGGCCGTGCCGCCTCCGA
GGTTGCCAGCGCGTTTGGGGTGTCCTGGTGGTTGGTCAACACGGTCGTGGTCGCCGCCGCGATGGTGCTGCCTTCCGTGGACCTGCTGGCCCCGACACGG
CTGGGCATCGATGAACACCGCTACAGGTCCGTGCGGTGGTTCAAGAACGAGACCACGGGCAAGTGGTCCCGGTATGAGCCCTGGATGTCAACGATCGTGG
ACGTCGACACCGGTCAGGTGTTGGGCATCGTGGACGGGCGCGACAGCCGCGGCGTGGGAGCCTGGCTCAAGGCCCGCCCCGCCACCTGGCTGGCCGGCAT
TGAGACTGTCGGCATCGACCCGTCAGCGGCGTTCCGCAAGGCACTGCGAGAGAACCTGCCCGACGCCGCCGTTTCCGTGGATCACTTCCATTTGGTGCAG
CTCGGAAATGACATGCTCACCAAGGTCCGCCAACGCGTGTCCCGGGAGCAGAACGGGCGCCGGGGCCTGAAAACGGACAAGGCCTGGGCACACCGACAGC
TGTTGCTGCGCGGCTACGACACGCTCTCGGAGAACGGCAAGAAGCGTCTGGACGAGGTCTTTGCCACTGACGACCCGACGCAGGAACTCGTCGCCTCCTG
GGGTGTCAAGGAAGCCCTGCGGCTGCTGCTTTCGGCCACCAACCCGGCCAGCGTGGACGAGCGCAAAGCCTTCTTTGAACGACAAGTGAAAGCGGCAGCC
ATGAAAGAAACCGACCGGCTGCTGGCCACTGTCAACAAGTGGTGGCCGGAGATCCAAACCCTGCTCGCCACCCGCGTCACCACAGCGAAGGTCGAGGCAG
CCAACACCATGATCAAAAACATCAAAAGGATCGCCCGCGGGTTCCGCAACCCAACCAACTACCAATCACGTATCCTACTAAGAAGTGCCGCCCGGACGGT
GGCATGAATTCATCTCAGCGGGCTGGTATTCACCACGAAACGCGAAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1293 bp430 aa1151407+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MNQPTQSCPNAATTLFNLPDYRVISVINDDDAGIRVVTVAADFPQACPACAVLSVRVHSRRIQRVRDILVAGPVRLLWAKRRFFCDEAACVRKTFAEATP
QVPRFARSTVRLKETLMDAVISSGRAASEVASAFGVSWWLVNTVVVAAAMVLPSVDLLAPTRLGIDEHRYRSVRWFKNETTGKWSRYEPWMSTIVDVDTG
QVLGIVDGRDSRGVGAWLKARPATWLAGIETVGIDPSAAFRKALRENLPDAAVSVDHFHLVQLGNDMLTKVRQRVSREQNGRRGLKTDKAWAHRQLLLRG
YDTLSENGKKRLDEVFATDDPTQELVASWGVKEALRLLLSATNPASVDERKAFFERQVKAAAMKETDRLLATVNKWWPEIQTLLATRVTTAKVEAANTMI
KNIKRIARGFRNPTNYQSRILLRSAARTVA

 

Blast result :
Comments
ISArsp7 is 65% aa similar to ISMlu13.
References
1] Krzysztof Romaniuk (2018) Direct submission.