ISMlu9
- Family IS481
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| CP001628 | ND | Micrococcus luteus | Micrococcus luteus NCTC 2665 |
DNA section
IS Length : 1115 bp
Ends
IR Length : 22/30
IRL : TGTTGTGGGGCATGAGGTTCTTGCCACGGGGTACGGGCTGAGATGAGACG
IRR : TGTAGGAGGGCATGACGTTGTTGACTCGGGCCGGGGCCAACGAGGCCGGC
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| TCAGGGGACCAG | GCTAGT | GCCCGGAGCCT | 6 |
DNA sequence
TGTTGTGGGGCATGAGGTTCTTGCCACGGGGTACGGGCTGAGATGAGACGAGTGGGCCTCTCCCGCAGGATGGAAGTTCCTACACCACCCACCTGCCCGA
AAAGACCCACTCATGACTCACGCTAATGCACCCCTGACTCCCACCGGCCGTCTCAGGATGGTCCACCGCCACCTGCACGACGGGATCCCACAGGCGCACG
TGGCCGCCGAGTTCCGGGTGAGCCGGCCCACGGTGGCTACCTGGGTGGCCCGCTACCGTGCCGAAGGCGAGGCCGGCCTTCAGGACCTGTCCAGCCGGCC
GCACCGTTCACCTGCCCAGCTCGACCCCGAGGTGGTGGCCCAGATCCAGACCCTGCGCCGGGAGCGCAAGTGGTCCGCACGGCGCATCCATCACCACCTC
GTCTCTGAAGGCCACCGGGTGTGCCTCCGAACGGTGGGCAGGTGGCTGCACCGGCTGGGCATCTCCCGGTTGCCAGACCTCGCGCCCACGGGTGAGGACC
TGCGCCAACGACCGCAGAAGATCACCGCCCGCGGCCCGGGGCACATGGTGCACCTGGACGTGAAGAAGATCGGGCGCATCCCCGAGGGGGGCGGCTGGCG
TGCTCACGGACGGGACTCCGAGAACGCGCGAGCAGCCAAGCGCGGGCCTGGCCGACGGGTCGGCTACACCTACCTGCACTCGGCGATCGACGGGTTCACC
CGCCTGGCCTACACCGAGGCGTTGGAGGACGAGCGGGCGGCCACGACCGTGAGCTTCTACTGCCGGGCGCGGGCGTTCTTCGCCGCCCACGGCATCCGGA
TCGACAGGGTGGTCACGGACAACGGGAACAACTACCGGGCTGCGGACTTCACCGCCAAGGTGGTCTCGCTCGGGGGCCGGCACCACCGGATCCGCCCCTA
CACCCCGCGCCATAACGGGAAGGTCGAACGCTACAACCGGCTGATGGTCGATGAGGTCCTCTACGCCCGCCCGTACTCCTCAGAGACGGCTCGGCGTGAG
GCCCTGCAGGTGTGGGTGAACCACTACAACTATCATCGGCCTCATACCTCCTGCGGGGACGCCCCGCCGGCCTCGTTGGCCCCGGCCCGAGTCAACAACG
TCATGCCCTCCTACA
AAAGACCCACTCATGACTCACGCTAATGCACCCCTGACTCCCACCGGCCGTCTCAGGATGGTCCACCGCCACCTGCACGACGGGATCCCACAGGCGCACG
TGGCCGCCGAGTTCCGGGTGAGCCGGCCCACGGTGGCTACCTGGGTGGCCCGCTACCGTGCCGAAGGCGAGGCCGGCCTTCAGGACCTGTCCAGCCGGCC
GCACCGTTCACCTGCCCAGCTCGACCCCGAGGTGGTGGCCCAGATCCAGACCCTGCGCCGGGAGCGCAAGTGGTCCGCACGGCGCATCCATCACCACCTC
GTCTCTGAAGGCCACCGGGTGTGCCTCCGAACGGTGGGCAGGTGGCTGCACCGGCTGGGCATCTCCCGGTTGCCAGACCTCGCGCCCACGGGTGAGGACC
TGCGCCAACGACCGCAGAAGATCACCGCCCGCGGCCCGGGGCACATGGTGCACCTGGACGTGAAGAAGATCGGGCGCATCCCCGAGGGGGGCGGCTGGCG
TGCTCACGGACGGGACTCCGAGAACGCGCGAGCAGCCAAGCGCGGGCCTGGCCGACGGGTCGGCTACACCTACCTGCACTCGGCGATCGACGGGTTCACC
CGCCTGGCCTACACCGAGGCGTTGGAGGACGAGCGGGCGGCCACGACCGTGAGCTTCTACTGCCGGGCGCGGGCGTTCTTCGCCGCCCACGGCATCCGGA
TCGACAGGGTGGTCACGGACAACGGGAACAACTACCGGGCTGCGGACTTCACCGCCAAGGTGGTCTCGCTCGGGGGCCGGCACCACCGGATCCGCCCCTA
CACCCCGCGCCATAACGGGAAGGTCGAACGCTACAACCGGCTGATGGTCGATGAGGTCCTCTACGCCCGCCCGTACTCCTCAGAGACGGCTCGGCGTGAG
GCCCTGCAGGTGTGGGTGAACCACTACAACTATCATCGGCCTCATACCTCCTGCGGGGACGCCCCGCCGGCCTCGTTGGCCCCGGCCCGAGTCAACAACG
TCATGCCCTCCTACA
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1005 bp | 335 aa | 113 | 1117 | + | No |
Chemistry : DDE
ORF sequence :
MTHANAPLTPTGRLRMVHRHLHDGIPQAHVAAEFRVSRPTVATWVARYRAEGEAGLQDLSSRPHRSPAQLDPEVVAQIQTLRRERKWSARRIHHHLVSEG
HRVCLRTVGRWLHRLGISRLPDLAPTGEDLRQRPQKITARGPGHMVHLDVKKIGRIPEGGGWRAHGRDSENARAAKRGPGRRVGYTYLHSAIDGFTRLAY
TEALEDERAATTVSFYCRARAFFAAHGIRIDRVVTDNGNNYRAADFTAKVVSLGGRHHRIRPYTPRHNGKVERYNRLMVDEVLYARPYSSETARREALQV
WVNHYNYHRPHTSCGDAPPASLAPARVNNVMPSYS
HRVCLRTVGRWLHRLGISRLPDLAPTGEDLRQRPQKITARGPGHMVHLDVKKIGRIPEGGGWRAHGRDSENARAAKRGPGRRVGYTYLHSAIDGFTRLAY
TEALEDERAATTVSFYCRARAFFAAHGIRIDRVVTDNGNNYRAADFTAKVVSLGGRHHRIRPYTPRHNGKVERYNRLMVDEVLYARPYSSETARREALQV
WVNHYNYHRPHTSCGDAPPASLAPARVNNVMPSYS
Blast result :
Comments
ISMlu9 is 97% aa similar to ISMlu8.
The STOP codon is done by the insertion site.
The STOP codon is done by the insertion site.
References
1] ISfinder annotation (2018)
2] Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Lowry,S., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Lykidis,A., Young,M. and Greenblatt,C. (2009) Direct GenBank submission.
2] Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Lowry,S., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Lykidis,A., Young,M. and Greenblatt,C. (2009) Direct GenBank submission.