ISEc59

  • Family IS6
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KX246266 ND Escherichia coli
Escherichia coli AHCH67 plasmid pHNAH67
DNA section
IS Length : 891 bp

Ends


IR Length : 17/23

IRL : GGCCTTGTCGCAAATTCTTCAGGTTAACTCGATGTTGACCATGGGGAGAG
IRR : GGGCGTGTCGCAAACACTTTTGGAGGCAGCTATCACCCAGCCAAGGCCGG

Insertion site


Left flankDirect repeatRight flankDR Length
CGGAACGCATGGAACAATTC0

DNA sequence

GGCCTTGTCGCAAATTCTTCAGGTTAACTCGATGTTGACCATGGGGAGAGAAGTTGCCGCTCCTGATATTGCGGAGCGAGCCGATGATTTTGAATACCAT
TGCCGAAAAGCTGAAGCGCCAGTCGAAGGATGATTTCAAGGGCAGGCATTTCGAGGCCTGGCTGATTGTACAGGCGGTTGCCTGGTACTTGCGCTACCCG
CTCAGCTATCGTGACTTGGAAGAGATGTTTCGCGAGCGGGGCTTCGAGGTCGATCATAGCACGATCAACCGCTGGGTATTGGCTTATGCACCTGTCATCG
AGAAACGGCTGCGGCAGTTTCGTCGACCCCATTGCGGCTCGGTCCGGATTGATGAGACCTATGTCAAGATCCGCGGCAAATGGCGCTATCTGTACCGAGC
CATCGATAAGCATGGCAATCCGGTGGATTTCCTGCTGACCGCTAAGCGCGATCTCGACGCTGCCAAGCGGTTCTTCCGAAAGATGCTTAAAGATGAACCC
TTGTTGTCGCCGAACAGGATTGGGACGGACGGGGCCAACACCTTCCCGTCAACGATCAAAACGTCGGTTGATGATGGGCTTCTCCATCCCGATCCCGTGC
ATTATGTGACCAAACATCTCCAGCAGGGGATTGAGAGCGACCATTTCCGGGTGAAGAAGAACATGCCGAAGATCGGCGGTTTCCAATCCTTTAACACGGC
GCGGCGAACCATCGCGGGTTTCGAGGCGATGCTGTGGCTGCGGAAGGGCTTTGGCTTTTCAGGCGGCTGGACCGTCAATGACCAGAATGATTTGCTTGCG
CGCCTCTTCGGACTGCAAAAGGTTAACAAAGCATGAAAATACCGGCCTTGGCTGGGTGATAGCTGCCTCCAAAAGTGTTTGCGACACGCCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
753 bp250 aa84836+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MILNTIAEKLKRQSKDDFKGRHFEAWLIVQAVAWYLRYPLSYRDLEEMFRERGFEVDHSTINRWVLAYAPVIEKRLRQFRRPHCGSVRIDETYVKIRGKW
RYLYRAIDKHGNPVDFLLTAKRDLDAAKRFFRKMLKDEPLLSPNRIGTDGANTFPSTIKTSVDDGLLHPDPVHYVTKHLQQGIESDHFRVKKNMPKIGGF
QSFNTARRTIAGFEAMLWLRKGFGFSGGWTVNDQNDLLARLFGLQKVNKA

 

Blast result :
Comments
ISEc59 is 98% aa similar to ISRle7.
References
1] ISfinder submission (2018)
2] Liu,J.H., Wang,J. and Yang,X.Y. (2016) Direct GenBank submission.