ISEc59
- Family IS6
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
KX246266 | ND | Escherichia coli | Escherichia coli AHCH67 plasmid pHNAH67 |
DNA section
IS Length : 891 bp
Ends
IR Length : 17/23
IRL : GGCCTTGTCGCAAATTCTTCAGGTTAACTCGATGTTGACCATGGGGAGAG
IRR : GGGCGTGTCGCAAACACTTTTGGAGGCAGCTATCACCCAGCCAAGGCCGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CGGAACGCAT | GGAACAATTC | 0 |
DNA sequence
GGCCTTGTCGCAAATTCTTCAGGTTAACTCGATGTTGACCATGGGGAGAGAAGTTGCCGCTCCTGATATTGCGGAGCGAGCCGATGATTTTGAATACCAT
TGCCGAAAAGCTGAAGCGCCAGTCGAAGGATGATTTCAAGGGCAGGCATTTCGAGGCCTGGCTGATTGTACAGGCGGTTGCCTGGTACTTGCGCTACCCG
CTCAGCTATCGTGACTTGGAAGAGATGTTTCGCGAGCGGGGCTTCGAGGTCGATCATAGCACGATCAACCGCTGGGTATTGGCTTATGCACCTGTCATCG
AGAAACGGCTGCGGCAGTTTCGTCGACCCCATTGCGGCTCGGTCCGGATTGATGAGACCTATGTCAAGATCCGCGGCAAATGGCGCTATCTGTACCGAGC
CATCGATAAGCATGGCAATCCGGTGGATTTCCTGCTGACCGCTAAGCGCGATCTCGACGCTGCCAAGCGGTTCTTCCGAAAGATGCTTAAAGATGAACCC
TTGTTGTCGCCGAACAGGATTGGGACGGACGGGGCCAACACCTTCCCGTCAACGATCAAAACGTCGGTTGATGATGGGCTTCTCCATCCCGATCCCGTGC
ATTATGTGACCAAACATCTCCAGCAGGGGATTGAGAGCGACCATTTCCGGGTGAAGAAGAACATGCCGAAGATCGGCGGTTTCCAATCCTTTAACACGGC
GCGGCGAACCATCGCGGGTTTCGAGGCGATGCTGTGGCTGCGGAAGGGCTTTGGCTTTTCAGGCGGCTGGACCGTCAATGACCAGAATGATTTGCTTGCG
CGCCTCTTCGGACTGCAAAAGGTTAACAAAGCATGAAAATACCGGCCTTGGCTGGGTGATAGCTGCCTCCAAAAGTGTTTGCGACACGCCC
TGCCGAAAAGCTGAAGCGCCAGTCGAAGGATGATTTCAAGGGCAGGCATTTCGAGGCCTGGCTGATTGTACAGGCGGTTGCCTGGTACTTGCGCTACCCG
CTCAGCTATCGTGACTTGGAAGAGATGTTTCGCGAGCGGGGCTTCGAGGTCGATCATAGCACGATCAACCGCTGGGTATTGGCTTATGCACCTGTCATCG
AGAAACGGCTGCGGCAGTTTCGTCGACCCCATTGCGGCTCGGTCCGGATTGATGAGACCTATGTCAAGATCCGCGGCAAATGGCGCTATCTGTACCGAGC
CATCGATAAGCATGGCAATCCGGTGGATTTCCTGCTGACCGCTAAGCGCGATCTCGACGCTGCCAAGCGGTTCTTCCGAAAGATGCTTAAAGATGAACCC
TTGTTGTCGCCGAACAGGATTGGGACGGACGGGGCCAACACCTTCCCGTCAACGATCAAAACGTCGGTTGATGATGGGCTTCTCCATCCCGATCCCGTGC
ATTATGTGACCAAACATCTCCAGCAGGGGATTGAGAGCGACCATTTCCGGGTGAAGAAGAACATGCCGAAGATCGGCGGTTTCCAATCCTTTAACACGGC
GCGGCGAACCATCGCGGGTTTCGAGGCGATGCTGTGGCTGCGGAAGGGCTTTGGCTTTTCAGGCGGCTGGACCGTCAATGACCAGAATGATTTGCTTGCG
CGCCTCTTCGGACTGCAAAAGGTTAACAAAGCATGAAAATACCGGCCTTGGCTGGGTGATAGCTGCCTCCAAAAGTGTTTGCGACACGCCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
753 bp | 250 aa | 84 | 836 | + | No |
Chemistry : DDE
ORF sequence :
MILNTIAEKLKRQSKDDFKGRHFEAWLIVQAVAWYLRYPLSYRDLEEMFRERGFEVDHSTINRWVLAYAPVIEKRLRQFRRPHCGSVRIDETYVKIRGKW
RYLYRAIDKHGNPVDFLLTAKRDLDAAKRFFRKMLKDEPLLSPNRIGTDGANTFPSTIKTSVDDGLLHPDPVHYVTKHLQQGIESDHFRVKKNMPKIGGF
QSFNTARRTIAGFEAMLWLRKGFGFSGGWTVNDQNDLLARLFGLQKVNKA
RYLYRAIDKHGNPVDFLLTAKRDLDAAKRFFRKMLKDEPLLSPNRIGTDGANTFPSTIKTSVDDGLLHPDPVHYVTKHLQQGIESDHFRVKKNMPKIGGF
QSFNTARRTIAGFEAMLWLRKGFGFSGGWTVNDQNDLLARLFGLQKVNKA
Blast result :
Comments
ISEc59 is 98% aa similar to ISRle7.
References
1] ISfinder submission (2018)
2] Liu,J.H., Wang,J. and Yang,X.Y. (2016) Direct GenBank submission.
2] Liu,J.H., Wang,J. and Yang,X.Y. (2016) Direct GenBank submission.