ISHsal9
- Family IS630
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP038631 | ND | Halobacterium salinarum | Halobacterium salinarum DSM 3754 Halobacterium salinarum 91-R6 |
DNA section
IS Length : 1056 bp
Ends
IR Length : 18/26
IRL : TAGTAACCGGTAGAACTTTTCACTCAGAGATAGTTGCAGTAGCTAGTGAA
IRR : TAGTAGACGTTAGAAGTAATTGCTCACTTTTGGAACGGAGAGCTGGTTGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AACTTCAACAGC | TA | GCCAATCCACAC | 2 |
DNA sequence
TAGTAACCGGTAGAACTTTTCACTCAGAGATAGTTGCAGTAGCTAGTGAATCATCTCGACGAGATCATCGTCGAGGAATTGCAAGACGCTCTCGACAACG
TGGACGGAAAGAAGCCGACAAAACGGCTCTTAGCGGCAATCGCGTACAAGAATTGTGTAACGCAGACCGAGCTAGCCGAGTGGTACGACGTGCAGCGACG
GACCATCTACAGCTGGCTCAAGCGACTCGACACTGACGAGTCGCTTGAGCAAGCCGTGTCTGACGATAAACGAACTGGGAGAAAGCGTAAACTCTCAGAA
TCACAGCAGGAAGCATTCGAAGAAACCGTTCACGATCCACCTGAAGAGGTCGGGATTGACGCGCCGGCGTGGACGCCGGCGCTTGCTCAAGAGTATCTCG
AAGAAACATACGGCGCTGAGTATTCAATCCCGAGTTGTCGGCGATTGCTGAAAGAAGCGGGATTGAGCTATCAAAAACCACGCCGTTCAGCCGCCGAAGC
CGACGAAGATGACCACAAAGAATTCCACGACGAGCTCAAAAAAAAGCGGCGGGAAATGGACGCCACCGTAGTCTGTATCGATCAAACCAAGAAATCCGTG
CAAGTTGAGCCGCGTGCCGCGTGGTTTCCGCGCGGCACGCGGCCCTCGGTCGAGCTTTCAGGCCAACGTGATTGGACGTGTCTGCTGGGCGCGATCACCG
AGGACGGTGATCGCTTCTTCTCTCGGTTCACCGAGTACGTCACGGCCGAACACGCAAAACATTTCATTTTAGCATTATGTGAAGAATTCGAAGATGACTT
GATCGTCGTGTTGGACGGAGCGCCGTATTTTCAGGCGTCGGCGGTCACGGACCTGGCGGCCCGTGACGACCTCGCCTTCGTGACGTTACCCTCGTATTCA
CCGGAGTTGAATCCGGTCGAAGAATGCTGGAGACAGCTGCAAGCCGCGCTGAGCAACCGCTTCTTTGACTCACTCGACGAGCTAACGACCGCAATCGATA
CCGCTCTCAACCAGCTCTCCGTTCCAAAAGTGAGCAATTACTTCTAACGTCTACTA
TGGACGGAAAGAAGCCGACAAAACGGCTCTTAGCGGCAATCGCGTACAAGAATTGTGTAACGCAGACCGAGCTAGCCGAGTGGTACGACGTGCAGCGACG
GACCATCTACAGCTGGCTCAAGCGACTCGACACTGACGAGTCGCTTGAGCAAGCCGTGTCTGACGATAAACGAACTGGGAGAAAGCGTAAACTCTCAGAA
TCACAGCAGGAAGCATTCGAAGAAACCGTTCACGATCCACCTGAAGAGGTCGGGATTGACGCGCCGGCGTGGACGCCGGCGCTTGCTCAAGAGTATCTCG
AAGAAACATACGGCGCTGAGTATTCAATCCCGAGTTGTCGGCGATTGCTGAAAGAAGCGGGATTGAGCTATCAAAAACCACGCCGTTCAGCCGCCGAAGC
CGACGAAGATGACCACAAAGAATTCCACGACGAGCTCAAAAAAAAGCGGCGGGAAATGGACGCCACCGTAGTCTGTATCGATCAAACCAAGAAATCCGTG
CAAGTTGAGCCGCGTGCCGCGTGGTTTCCGCGCGGCACGCGGCCCTCGGTCGAGCTTTCAGGCCAACGTGATTGGACGTGTCTGCTGGGCGCGATCACCG
AGGACGGTGATCGCTTCTTCTCTCGGTTCACCGAGTACGTCACGGCCGAACACGCAAAACATTTCATTTTAGCATTATGTGAAGAATTCGAAGATGACTT
GATCGTCGTGTTGGACGGAGCGCCGTATTTTCAGGCGTCGGCGGTCACGGACCTGGCGGCCCGTGACGACCTCGCCTTCGTGACGTTACCCTCGTATTCA
CCGGAGTTGAATCCGGTCGAAGAATGCTGGAGACAGCTGCAAGCCGCGCTGAGCAACCGCTTCTTTGACTCACTCGACGAGCTAACGACCGCAATCGATA
CCGCTCTCAACCAGCTCTCCGTTCCAAAAGTGAGCAATTACTTCTAACGTCTACTA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1002 bp | 333 aa | 46 | 1047 | + | No |
Chemistry : DDE
ORF sequence :
MNHLDEIIVEELQDALDNVDGKKPTKRLLAAIAYKNCVTQTELAEWYDVQRRTIYSWLKRLDTDESLEQAVSDDKRTGRKRKLSESQQEAFEETVHDPPE
EVGIDAPAWTPALAQEYLEETYGAEYSIPSCRRLLKEAGLSYQKPRRSAAEADEDDHKEFHDELKKKRREMDATVVCIDQTKKSVQVEPRAAWFPRGTRP
SVELSGQRDWTCLLGAITEDGDRFFSRFTEYVTAEHAKHFILALCEEFEDDLIVVLDGAPYFQASAVTDLAARDDLAFVTLPSYSPELNPVEECWRQLQA
ALSNRFFDSLDELTTAIDTALNQLSVPKVSNYF
EVGIDAPAWTPALAQEYLEETYGAEYSIPSCRRLLKEAGLSYQKPRRSAAEADEDDHKEFHDELKKKRREMDATVVCIDQTKKSVQVEPRAAWFPRGTRP
SVELSGQRDWTCLLGAITEDGDRFFSRFTEYVTAEHAKHFILALCEEFEDDLIVVLDGAPYFQASAVTDLAARDDLAFVTLPSYSPELNPVEECWRQLQA
ALSNRFFDSLDELTTAIDTALNQLSVPKVSNYF
Blast result :
Comments
ISHsal9 is 96% aa similar to ISHvo16.
References
1] Pfeiffer F., Marchfelder A., Habermann BH., Dyall-Smith M. (2018) Direct submission.
2] Pfeiffer F, Marchfelder A, Habermann B, Dyall-Smith ML. (2019) Microbiol Resour Announc. 11;8(28).
2] Pfeiffer F, Marchfelder A, Habermann B, Dyall-Smith ML. (2019) Microbiol Resour Announc. 11;8(28).