ISHsal7
- Family IS66
- Group ISBst12
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP038631 | ND | Halobacterium salinarum | Halobacterium salinarum DSM 3754 Halobacterium salinarum 91-R6 |
DNA section
IS Length : 1546 bp
Ends
IR Length : 11
IRL : GTACGTGTTTAGTCCCAGAACGATTTCGGTAGGCTCTCGTAGGAGTCGTC
IRR : GTACGTGTTTACCTCGAGGATGCAACAGCCGGCACAGCCTGAGCTCGTGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GCCCAAGAGTAT | CTCGAAGA | TACGTACGACGT | 8 |
DNA sequence
GTACGTGTTTAGTCCCAGAACGATTTCGGTAGGCTCTCGTAGGAGTCGTCCAACTAGTGCAGTAGATCGATGCAGCAGGCGAACGAGTGCATCTTTGAGG
GATGGTCTCCGGGACGGAGACCATCCCGTCTCGCCTGCTCATGACGTCGTCCGAGCCGTCCAAAGAAGAGCTTCTTACGCAGTTTGCTGAGCTCAAGCAA
GAAGTCGAGGAACTACGGAAGGAGAATCAACGCCTCAGAGCCAAACTCCGGTGGTACGAAGGGCCGCATACACCACCGAGCAAGGACCAATCAGACCAAG
AGGAGTCGTCCTCGTCCGATGGAGACGAGGACGACGAACAGCCACGTACTGACGGTGGCACGCCTGGCCGAAAAGCTGGACACGAGCCAGAATGGCGTGA
TGCCCCTGACCCTAACGAAGAAATCGAGGTCACGTGTGACTGCTGTCCAGAGTGTGGTGAACAATTCGACGAGTCGGCGGGCGTCAGCCCCCGACTCGTC
GAGGAACTCCCAGATCCACAGCCGCCCGAAGTCACACAGTACAATCGTCACCACTACGAGTGCCATTCATGTGGGACCGAGACTGTCGCCTCACACCCCG
ACTGCCCCGATGAGGGGCAGTTCGGGGTGAACGTCATCGCACAGTCAGCGCTTTCGCGGTACGATCACCGGCTTCCCTACCGCAAGATCGGTGACCGCTT
CGAGCAACTACACGGACTGGAGCTGTCCGCCGCATCAACGTGGCACGCGACCGAGCGCGCTGCGCGCGCCGGTCGCTGCGAATACGAGCAGATCCGTCGC
CAGATCCAGCAAGCCGACGTTGTCCACGTTGACGAGACCGGAATCAAACGGGACGGTGAACAGGCGTGGCTGTGGACGTTCACCACGGACGAGCACACGC
TGTACGCGGTCAGAGAGAGTCGTGGGAGTGATGTTCCCGCGGAAGTCCTCGGTGAGGACTTCGCGGGAACGGTCATCTGTGATGGGTGGACGGCGTATCC
AGCCTTCAGCGAGACGCTTCAGCGGTGCTGGGCACACATTCTCCGGGAAGCTGAAGAAGCAGCCGAACAGCAGGATGAAGGGAAACCGATCTACCGTGCT
CTGAGACAGCTGTACGTCGCTCTCCAGGCCCGGCTGGAGAGCGACGTGACAGTGCGCGAGCGGGCAGAACTACAGCGTGTCGCGCGAAGGGAGCTTGAGT
CGCTGATTGAGCGGTCGGTTCCCGACGGACCAGTGGCAACACTGCTCGGGAAAATCGAAGGAGGTCTCGACCACTGGCTCACCTTCGTCGGTGAGCCAGG
GGTCTCCCCGACGAACAACGCTGCGGAAAACGCGCTGCGTGAGCCGGTGGTTCTCCGGAAGCTCATCGGAACGCTCCGTAATGACCGCGGTATGTTCGTT
CACGAGACGCTGCTGTCCCTGCTGGCGACGTGGCGCCAGCAGGGACGCAATCCCTACGAGGAACTCAGGCGAGTCGTCCAGGACAACGAGATGCTTTCAC
GAGCTCAGGCTGTGCCGGCTGTTGCATCCTCGAGGTAAACACGTAC
GATGGTCTCCGGGACGGAGACCATCCCGTCTCGCCTGCTCATGACGTCGTCCGAGCCGTCCAAAGAAGAGCTTCTTACGCAGTTTGCTGAGCTCAAGCAA
GAAGTCGAGGAACTACGGAAGGAGAATCAACGCCTCAGAGCCAAACTCCGGTGGTACGAAGGGCCGCATACACCACCGAGCAAGGACCAATCAGACCAAG
AGGAGTCGTCCTCGTCCGATGGAGACGAGGACGACGAACAGCCACGTACTGACGGTGGCACGCCTGGCCGAAAAGCTGGACACGAGCCAGAATGGCGTGA
TGCCCCTGACCCTAACGAAGAAATCGAGGTCACGTGTGACTGCTGTCCAGAGTGTGGTGAACAATTCGACGAGTCGGCGGGCGTCAGCCCCCGACTCGTC
GAGGAACTCCCAGATCCACAGCCGCCCGAAGTCACACAGTACAATCGTCACCACTACGAGTGCCATTCATGTGGGACCGAGACTGTCGCCTCACACCCCG
ACTGCCCCGATGAGGGGCAGTTCGGGGTGAACGTCATCGCACAGTCAGCGCTTTCGCGGTACGATCACCGGCTTCCCTACCGCAAGATCGGTGACCGCTT
CGAGCAACTACACGGACTGGAGCTGTCCGCCGCATCAACGTGGCACGCGACCGAGCGCGCTGCGCGCGCCGGTCGCTGCGAATACGAGCAGATCCGTCGC
CAGATCCAGCAAGCCGACGTTGTCCACGTTGACGAGACCGGAATCAAACGGGACGGTGAACAGGCGTGGCTGTGGACGTTCACCACGGACGAGCACACGC
TGTACGCGGTCAGAGAGAGTCGTGGGAGTGATGTTCCCGCGGAAGTCCTCGGTGAGGACTTCGCGGGAACGGTCATCTGTGATGGGTGGACGGCGTATCC
AGCCTTCAGCGAGACGCTTCAGCGGTGCTGGGCACACATTCTCCGGGAAGCTGAAGAAGCAGCCGAACAGCAGGATGAAGGGAAACCGATCTACCGTGCT
CTGAGACAGCTGTACGTCGCTCTCCAGGCCCGGCTGGAGAGCGACGTGACAGTGCGCGAGCGGGCAGAACTACAGCGTGTCGCGCGAAGGGAGCTTGAGT
CGCTGATTGAGCGGTCGGTTCCCGACGGACCAGTGGCAACACTGCTCGGGAAAATCGAAGGAGGTCTCGACCACTGGCTCACCTTCGTCGGTGAGCCAGG
GGTCTCCCCGACGAACAACGCTGCGGAAAACGCGCTGCGTGAGCCGGTGGTTCTCCGGAAGCTCATCGGAACGCTCCGTAATGACCGCGGTATGTTCGTT
CACGAGACGCTGCTGTCCCTGCTGGCGACGTGGCGCCAGCAGGGACGCAATCCCTACGAGGAACTCAGGCGAGTCGTCCAGGACAACGAGATGCTTTCAC
GAGCTCAGGCTGTGCCGGCTGTTGCATCCTCGAGGTAAACACGTAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1437 bp | 478 aa | 102 | 1538 | + | No |
Chemistry : DDE
ORF sequence :
MVSGTETIPSRLLMTSSEPSKEELLTQFAELKQEVEELRKENQRLRAKLRWYEGPHTPPSKDQSDQEESSSSDGDEDDEQPRTDGGTPGRKAGHEPEWRD
APDPNEEIEVTCDCCPECGEQFDESAGVSPRLVEELPDPQPPEVTQYNRHHYECHSCGTETVASHPDCPDEGQFGVNVIAQSALSRYDHRLPYRKIGDRF
EQLHGLELSAASTWHATERAARAGRCEYEQIRRQIQQADVVHVDETGIKRDGEQAWLWTFTTDEHTLYAVRESRGSDVPAEVLGEDFAGTVICDGWTAYP
AFSETLQRCWAHILREAEEAAEQQDEGKPIYRALRQLYVALQARLESDVTVRERAELQRVARRELESLIERSVPDGPVATLLGKIEGGLDHWLTFVGEPG
VSPTNNAAENALREPVVLRKLIGTLRNDRGMFVHETLLSLLATWRQQGRNPYEELRRVVQDNEMLSRAQAVPAVASSR
APDPNEEIEVTCDCCPECGEQFDESAGVSPRLVEELPDPQPPEVTQYNRHHYECHSCGTETVASHPDCPDEGQFGVNVIAQSALSRYDHRLPYRKIGDRF
EQLHGLELSAASTWHATERAARAGRCEYEQIRRQIQQADVVHVDETGIKRDGEQAWLWTFTTDEHTLYAVRESRGSDVPAEVLGEDFAGTVICDGWTAYP
AFSETLQRCWAHILREAEEAAEQQDEGKPIYRALRQLYVALQARLESDVTVRERAELQRVARRELESLIERSVPDGPVATLLGKIEGGLDHWLTFVGEPG
VSPTNNAAENALREPVVLRKLIGTLRNDRGMFVHETLLSLLATWRQQGRNPYEELRRVVQDNEMLSRAQAVPAVASSR
Blast result :
Comments
ISHsal7 is 95% aa similar to ISNamo3.
References
1] Pfeiffer F., Marchfelder A., Habermann BH., Dyall-Smith M. (2018) Direct submission.
2] Pfeiffer F, Marchfelder A, Habermann B, Dyall-Smith ML. (2019) Microbiol Resour Announc. 11;8(28).
2] Pfeiffer F, Marchfelder A, Habermann B, Dyall-Smith ML. (2019) Microbiol Resour Announc. 11;8(28).