ISAba47

  • Family IS982
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Acinetobacter baumannii
Acinetobacter baumannii
Acinetobacter baumannii ST79 33
DNA section
IS Length : 972 bp

Ends


IR Length : 17/20

IRL : ACGCCAATCTCAACTTTTAAGTGCTTGAAATAAAAAGGACATAACCCAAT
IRR : ACGCAAATCTCAACTTAAAATAAGATTTTCGAACTGAATTGGCGAATGAC

Insertion site


Left flankDirect repeatRight flankDR Length
TGGAATTaAATattatactctaggc7

DNA sequence

ACGCCAATCTCAACTTTTAAGTGCTTGAAATAAAAAGGACATAACCCAATTTTAGTTTCGACCAAGAAATCAAAGCAAAGTTATGTCCATTGAAGAATTT
ATCATTTTTGTCTATTTAATCATAGAAGAACTTTACCTCATTGTTGTTGATCAACCGCTTAGAACTCGTGGCTTTCCACCTGCTGTGACTGATGTGGAAA
TCATCACTATGCAAATTGTGGGGGAATTTCTTAGTCTAGACACGGACAAAAGCATTTGGATGTATTTTAAAAACAATTGGTTAGAGTGGTTTCCAAAATT
AGGGTCTTACCCCAATTTCTGTAAGCACTGTGCAAACTTGTGGCATATCAATCAGAAAATTATGTCTCAACTCAATCATCGTTATGGTTCAGATAATATT
CACTTTATTGATGGTTTCCCAATCCCTGTCTGTGCTTACACAAGAGCCAGAGGACATAAAAACTTTAAAGAACATGCAAGTTTTAGTTATTGTGCTGCAA
AGCAAGAAAAATATTATGGGTTTAAAGGTCATATCGTCATTAATCTTTCAGGAATGATTACAGGTTATACCTTTGCCCCTGCTCATTGTGATGAACGAGA
TGTTGCTCCTGAGATCACAAAAAATATTTATGGTTTACTTGGAGCGGATAAGGGGTATTTAAGACCCGAGTTGACAAGGCATTTAGAATCTCAAGGTATT
GATTTACAAACACCATTTAGAAAAAATATGAAAGATTCCAGACCTAAAGATGCAATGCGAACGCTGATGAAGGCTCGGAGAAAGATTGAGACTGTGATTG
GTCAATTAACAGATCGCTTTCACATCCAAAAGGTAAGAGCAAAAAACTTATGGCATTTAACGCACCGTATAACGCGTAAAATTCTTTCACATACGGTTTG
TATTGTGCTAAATAAAAACTAGGTCATTCGCCAATTCAGTTCGAAAATCTTATTTTAAGTTGAGATTTGCGT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
840 bp279 aa83922+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSIEEFIIFVYLIIEELYLIVVDQPLRTRGFPPAVTDVEIITMQIVGEFLSLDTDKSIWMYFKNNWLEWFPKLGSYPNFCKHCANLWHINQKIMSQLNHR
YGSDNIHFIDGFPIPVCAYTRARGHKNFKEHASFSYCAAKQEKYYGFKGHIVINLSGMITGYTFAPAHCDERDVAPEITKNIYGLLGADKGYLRPELTRH
LESQGIDLQTPFRKNMKDSRPKDAMRTLMKARRKIETVIGQLTDRFHIQKVRAKNLWHLTHRITRKILSHTVCIVLNKN

 

Blast result :
Comments
ISAba47 is 94% aa similar to ISAba9.
References
1] Ignasi Roca (2018) Direct submission.