ISEcret7

  • Family IS5
  • Group IS5
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KP890201 ND Endozoicomonas endosymbiont
Endozoicomonas endosymbiont of Diplodus puntazzo
DNA section
IS Length : 1143 bp

Ends


IR Length : 15

IRL : GGAACCTCTGAAAAACGCTCACTAATCCAGTAAAATCCTGATGACTGGAT
IRR : GGAACCTCTGAAAAAGGTGTCGAGACTTCCATTTCAAGCTTTCCAGTGG

Insertion site


Left flankDirect repeatRight flankDR Length
TAATGAGAAAATTGAATATATCTACCG4

DNA sequence

GGAACCTCTGAAAAACGCTCACTAATCCAGTAAAATCCTGATGACTGGATCAGGGGGCAAAATGGATCAACTCAACTTTCTCAGAATAACCAGTCAGAGG
AAGCCTCTCAGATGTGAGAATTTCCTCAATGAAATGGATCAAGTGATACCCTGGAAAGCACTCTGTGAACTGATTGCTCCACACCGGCCTGAAGCGACCA
CTGGGCGCAAACTCAAAAGTACTGAGTTAATGTTGCGAATTAACTGCCTCCAGCAATGGTATGGTCTTTCTGACCCGGGGGTCGAAGATGCCATCAAAGA
CAGGCTTTCATTCCAGCGTTTTCTGCGCCTTGACCCTTTTACCGACACGGTTCCAGATGAAACAACCATTTTGAATTTTCGTCACCTGCTCGAAGAGCAT
GATCTTCAGGAAGCTATTTTTGAAGCGATCAATGAGCATCTGGAAGATAAAGGTTTGCTGATGAAGCGAGGTACACTGGTTGATGCAACCATTATCGCCG
CTCCAAGTAGTACCAAGAATAAAAGCAGAAAGCGCGATCCCGAAATGAGTTCCACCAAAAAAGGAAACCAATATTACTTTGGCATGAAAGCCCACATTGG
TGTTGATGGTGACAGCTCTCTTGTTCACTCCCTGACAGGTACCGAAGCCAAGCGTCATGACAGCACTCAGCGGGAAGAGCTCCTACAGGGAGAAGAGCAA
GTTGTAGGAGGCGATAAAGGTTATGCCGATGACCAGTACAAGAAAGCGTGTCGTGCTAATGATGTCGTCTACGCTATTTCTGATAAGGGAAAACGCAATC
ACCCTTTGTCGAACAGCCAGAAGAAGCGTAATCACAAGCTATCCAGCTGGCGTGCCAAAGTTGAACACCCATTTCAGGTGATTAAGTGTCAGTGGGGTTT
CCGAAAAGTCCGTTATCGGGGTTTGAAGAAGAACACCTGTCAGCTGTACATGCTGTTTGGTTTATACAACCTGTTCCGGGTCAGAAGAAAACTGTTAGCA
GGCTGACCATAGGGTCAGTGCGTCTGAAGTTCAGGCTGCACTGGTAAAAGAGCCTGAAAAGCAGCCTATATTGTCATTTTTGATTTTTTTTTAACCACTG
GAAAGCTTGAAATGGAAGTCTCGACACCTTTTTCAGAGGTTCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
945 bp314 aa621006+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MDQLNFLRITSQRKPLRCENFLNEMDQVIPWKALCELIAPHRPEATTGRKLKSTELMLRINCLQQWYGLSDPGVEDAIKDRLSFQRFLRLDPFTDTVPDE
TTILNFRHLLEEHDLQEAIFEAINEHLEDKGLLMKRGTLVDATIIAAPSSTKNKSRKRDPEMSSTKKGNQYYFGMKAHIGVDGDSSLVHSLTGTEAKRHD
STQREELLQGEEQVVGGDKGYADDQYKKACRANDVVYAISDKGKRNHPLSNSQKKRNHKLSSWRAKVEHPFQVIKCQWGFRKVRYRGLKKNTCQLYMLFG
LYNLFRVRRKLLAG

 

Blast result :
Comments
ISEcret7 is 67% aa similar to ISAzo27.
References
1] Helena Seth-Smith (2015) Direct submission.