ISEcret6
- Family ISNCY
- Group ISMae2
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
KP890200 | ND | Endozoicomonas endosymbiont | Endozoicomonas endosymbiont of Diplodus puntazzo |
DNA section
IS Length : 1603 bp
Ends
IR Length : 12/14
IRL : CAGCAATTCCCACTGAAGTGATTCGAGATAACAGCACCAAGGCTTCCAGC
IRR : CAGCGATTCCCGCTACGCACTTCTTAAAGCTGGATTCTAGAGGGTGTCCA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TTCTCTGGTCAC | AGGAAAACC | CATCGAAACAGA | 9 |
ACATCACAGATT | ACCCAGGCC | CGTTAGGGGAAA | 9 |
DNA sequence
CAGCAATTCCCACTGAAGTGATTCGAGATAACAGCACCAAGGCTTCCAGCCAGTTTTGCTTATTACAAAATCGCAAACTTTAAGGCAGGATATCTCGATA
TTGTGAACATTGTTGCTTTACTGTGCCGCCATCCAAACGAAAGACCATAGCTGAAAAACTGATCACTATCGTTTCAAAAGAAGCTTCGAAAATCCCAGAT
TTTCGAAAAAAAATCAGTCAGGGTGTAATACCTCTTCATGATGCCATCATGTCCGGCCTCGCCATGATGCATTTGAAGTACCCTTCATTACTTCAGTTTG
ATCGGGACTGTGTTAAGACACCAGCCAAGCTGCACAACCTGAAATCAATGTACGGCATTACTCAAGTACCCAGCGATACGTACTGTCGGGAAATGCTTGA
CCCTATTGAAACCCGTTATCTCCGTAAATTCTTTACTCTGCTGTTTGCTTTTGTTCAGCGCTCCGGGCGCCTCAGGCATTTTGAGTATTTTGAGGAAGGC
TATCTCGCACCGATTGATGGAACGGGGCATTTCTGTTCCGGCAAAATTCACTGCCCTGAATGCTGTGTGAAGAAGCCAGATAGCAAGACCCCTCAGTACT
ACCATCAACTGCTGGCTTGCTGCCTGGTCAAACCGGACAAAAAGGAAGTGCTTCCACTGATGCCAGAACCGATCATTCAGCAGCAGGATGCATCAAAGAA
TGATTGTGAAAAAACGGCACTGAAACGACTATTGGCCAACATATCCAGAGAACACCCACACCTTAAACTGGTGTTGAATTTTGATGACCTCTACTCCGAC
GGCCCGACCATCAAGTTGATGCAGTCCTACGGATACAGCTTCATCATGGTGGCAAAAGACACCTCTCATGTATCGCTTTACGAATCAGTGGATGAACTGG
ATAAGGCTGGCAAGGTAAAACGCTATCACTATACCGATGAGAACGGCTACCAGCATTGGTTCCGGTTCGTCAACGGAGTGTCCATCAACAAGTCCCATAA
AGAGACACTGGTCAATTATCTTGAATACGTAGAGACTGATCCGAAGGGCAACAAATACATCAACACATGGATAACCGACATTCAACTGACTGAAGAGAAT
GTGGTGAAAGTAATGCGAGGAGGCCGCGCCAGGTGGAAAATTGAGAACGAGACATTTAACACACTGAAAACACAGGGCTATCACCTCGAACACAATTACG
GGCATGGGAAGCAACACTTGGCGACCAATCTGGCCTGCCTGACGTTTACCGCTTTCCTCATCAACCAGATAGAGCAGCTGGCTTGCAAGTTCTTCCAGCA
GGCTCTTGAAGCAAAGAAGTCCAAAAAAGCATTATGGCTTGGGATCAGGGGCTTGTTTGACTGGTTCACCATCGACAACTGGGAAGATCTTTTTACAGCG
ATAATCGAAGGCAGGAGTGTCAGCCTAAAGCATTTGGTAGTAGATACCACATAGTTGAGACATTGGTAGCCCTGTTTAATCTGTGTTCTGAACTTGCTTG
TTTCCTGGCTGATAATTCAGTTCGATATCTCACGGCCTGAATAAGTGCCTGATTGGACACCCTCTAGAATCCAGCTTTAAGAAGTGCGTAGCGGGAATCG
CTG
TTGTGAACATTGTTGCTTTACTGTGCCGCCATCCAAACGAAAGACCATAGCTGAAAAACTGATCACTATCGTTTCAAAAGAAGCTTCGAAAATCCCAGAT
TTTCGAAAAAAAATCAGTCAGGGTGTAATACCTCTTCATGATGCCATCATGTCCGGCCTCGCCATGATGCATTTGAAGTACCCTTCATTACTTCAGTTTG
ATCGGGACTGTGTTAAGACACCAGCCAAGCTGCACAACCTGAAATCAATGTACGGCATTACTCAAGTACCCAGCGATACGTACTGTCGGGAAATGCTTGA
CCCTATTGAAACCCGTTATCTCCGTAAATTCTTTACTCTGCTGTTTGCTTTTGTTCAGCGCTCCGGGCGCCTCAGGCATTTTGAGTATTTTGAGGAAGGC
TATCTCGCACCGATTGATGGAACGGGGCATTTCTGTTCCGGCAAAATTCACTGCCCTGAATGCTGTGTGAAGAAGCCAGATAGCAAGACCCCTCAGTACT
ACCATCAACTGCTGGCTTGCTGCCTGGTCAAACCGGACAAAAAGGAAGTGCTTCCACTGATGCCAGAACCGATCATTCAGCAGCAGGATGCATCAAAGAA
TGATTGTGAAAAAACGGCACTGAAACGACTATTGGCCAACATATCCAGAGAACACCCACACCTTAAACTGGTGTTGAATTTTGATGACCTCTACTCCGAC
GGCCCGACCATCAAGTTGATGCAGTCCTACGGATACAGCTTCATCATGGTGGCAAAAGACACCTCTCATGTATCGCTTTACGAATCAGTGGATGAACTGG
ATAAGGCTGGCAAGGTAAAACGCTATCACTATACCGATGAGAACGGCTACCAGCATTGGTTCCGGTTCGTCAACGGAGTGTCCATCAACAAGTCCCATAA
AGAGACACTGGTCAATTATCTTGAATACGTAGAGACTGATCCGAAGGGCAACAAATACATCAACACATGGATAACCGACATTCAACTGACTGAAGAGAAT
GTGGTGAAAGTAATGCGAGGAGGCCGCGCCAGGTGGAAAATTGAGAACGAGACATTTAACACACTGAAAACACAGGGCTATCACCTCGAACACAATTACG
GGCATGGGAAGCAACACTTGGCGACCAATCTGGCCTGCCTGACGTTTACCGCTTTCCTCATCAACCAGATAGAGCAGCTGGCTTGCAAGTTCTTCCAGCA
GGCTCTTGAAGCAAAGAAGTCCAAAAAAGCATTATGGCTTGGGATCAGGGGCTTGTTTGACTGGTTCACCATCGACAACTGGGAAGATCTTTTTACAGCG
ATAATCGAAGGCAGGAGTGTCAGCCTAAAGCATTTGGTAGTAGATACCACATAGTTGAGACATTGGTAGCCCTGTTTAATCTGTGTTCTGAACTTGCTTG
TTTCCTGGCTGATAATTCAGTTCGATATCTCACGGCCTGAATAAGTGCCTGATTGGACACCCTCTAGAATCCAGCTTTAAGAAGTGCGTAGCGGGAATCG
CTG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1332 bp | 443 aa | 123 | 1454 | + | No |
Chemistry : Unknow
ORF sequence :
VPPSKRKTIAEKLITIVSKEASKIPDFRKKISQGVIPLHDAIMSGLAMMHLKYPSLLQFDRDCVKTPAKLHNLKSMYGITQVPSDTYCREMLDPIETRYL
RKFFTLLFAFVQRSGRLRHFEYFEEGYLAPIDGTGHFCSGKIHCPECCVKKPDSKTPQYYHQLLACCLVKPDKKEVLPLMPEPIIQQQDASKNDCEKTAL
KRLLANISREHPHLKLVLNFDDLYSDGPTIKLMQSYGYSFIMVAKDTSHVSLYESVDELDKAGKVKRYHYTDENGYQHWFRFVNGVSINKSHKETLVNYL
EYVETDPKGNKYINTWITDIQLTEENVVKVMRGGRARWKIENETFNTLKTQGYHLEHNYGHGKQHLATNLACLTFTAFLINQIEQLACKFFQQALEAKKS
KKALWLGIRGLFDWFTIDNWEDLFTAIIEGRSVSLKHLVVDTT
RKFFTLLFAFVQRSGRLRHFEYFEEGYLAPIDGTGHFCSGKIHCPECCVKKPDSKTPQYYHQLLACCLVKPDKKEVLPLMPEPIIQQQDASKNDCEKTAL
KRLLANISREHPHLKLVLNFDDLYSDGPTIKLMQSYGYSFIMVAKDTSHVSLYESVDELDKAGKVKRYHYTDENGYQHWFRFVNGVSINKSHKETLVNYL
EYVETDPKGNKYINTWITDIQLTEENVVKVMRGGRARWKIENETFNTLKTQGYHLEHNYGHGKQHLATNLACLTFTAFLINQIEQLACKFFQQALEAKKS
KKALWLGIRGLFDWFTIDNWEDLFTAIIEGRSVSLKHLVVDTT
Blast result :
Comments
ISEcret6 is 55% aa similar to ISMae2.
References
1]Helena Seth-Smith (2015) Direct submission.