ISEcret6

  • Family ISNCY
  • Group ISMae2
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KP890200 ND Endozoicomonas endosymbiont
Endozoicomonas endosymbiont of Diplodus puntazzo
DNA section
IS Length : 1603 bp

Ends


IR Length : 12/14

IRL : CAGCAATTCCCACTGAAGTGATTCGAGATAACAGCACCAAGGCTTCCAGC
IRR : CAGCGATTCCCGCTACGCACTTCTTAAAGCTGGATTCTAGAGGGTGTCCA

Insertion site


Left flankDirect repeatRight flankDR Length
TTCTCTGGTCACAGGAAAACCCATCGAAACAGA9
ACATCACAGATTACCCAGGCCCGTTAGGGGAAA9

DNA sequence

CAGCAATTCCCACTGAAGTGATTCGAGATAACAGCACCAAGGCTTCCAGCCAGTTTTGCTTATTACAAAATCGCAAACTTTAAGGCAGGATATCTCGATA
TTGTGAACATTGTTGCTTTACTGTGCCGCCATCCAAACGAAAGACCATAGCTGAAAAACTGATCACTATCGTTTCAAAAGAAGCTTCGAAAATCCCAGAT
TTTCGAAAAAAAATCAGTCAGGGTGTAATACCTCTTCATGATGCCATCATGTCCGGCCTCGCCATGATGCATTTGAAGTACCCTTCATTACTTCAGTTTG
ATCGGGACTGTGTTAAGACACCAGCCAAGCTGCACAACCTGAAATCAATGTACGGCATTACTCAAGTACCCAGCGATACGTACTGTCGGGAAATGCTTGA
CCCTATTGAAACCCGTTATCTCCGTAAATTCTTTACTCTGCTGTTTGCTTTTGTTCAGCGCTCCGGGCGCCTCAGGCATTTTGAGTATTTTGAGGAAGGC
TATCTCGCACCGATTGATGGAACGGGGCATTTCTGTTCCGGCAAAATTCACTGCCCTGAATGCTGTGTGAAGAAGCCAGATAGCAAGACCCCTCAGTACT
ACCATCAACTGCTGGCTTGCTGCCTGGTCAAACCGGACAAAAAGGAAGTGCTTCCACTGATGCCAGAACCGATCATTCAGCAGCAGGATGCATCAAAGAA
TGATTGTGAAAAAACGGCACTGAAACGACTATTGGCCAACATATCCAGAGAACACCCACACCTTAAACTGGTGTTGAATTTTGATGACCTCTACTCCGAC
GGCCCGACCATCAAGTTGATGCAGTCCTACGGATACAGCTTCATCATGGTGGCAAAAGACACCTCTCATGTATCGCTTTACGAATCAGTGGATGAACTGG
ATAAGGCTGGCAAGGTAAAACGCTATCACTATACCGATGAGAACGGCTACCAGCATTGGTTCCGGTTCGTCAACGGAGTGTCCATCAACAAGTCCCATAA
AGAGACACTGGTCAATTATCTTGAATACGTAGAGACTGATCCGAAGGGCAACAAATACATCAACACATGGATAACCGACATTCAACTGACTGAAGAGAAT
GTGGTGAAAGTAATGCGAGGAGGCCGCGCCAGGTGGAAAATTGAGAACGAGACATTTAACACACTGAAAACACAGGGCTATCACCTCGAACACAATTACG
GGCATGGGAAGCAACACTTGGCGACCAATCTGGCCTGCCTGACGTTTACCGCTTTCCTCATCAACCAGATAGAGCAGCTGGCTTGCAAGTTCTTCCAGCA
GGCTCTTGAAGCAAAGAAGTCCAAAAAAGCATTATGGCTTGGGATCAGGGGCTTGTTTGACTGGTTCACCATCGACAACTGGGAAGATCTTTTTACAGCG
ATAATCGAAGGCAGGAGTGTCAGCCTAAAGCATTTGGTAGTAGATACCACATAGTTGAGACATTGGTAGCCCTGTTTAATCTGTGTTCTGAACTTGCTTG
TTTCCTGGCTGATAATTCAGTTCGATATCTCACGGCCTGAATAAGTGCCTGATTGGACACCCTCTAGAATCCAGCTTTAAGAAGTGCGTAGCGGGAATCG
CTG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1332 bp443 aa1231454+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

VPPSKRKTIAEKLITIVSKEASKIPDFRKKISQGVIPLHDAIMSGLAMMHLKYPSLLQFDRDCVKTPAKLHNLKSMYGITQVPSDTYCREMLDPIETRYL
RKFFTLLFAFVQRSGRLRHFEYFEEGYLAPIDGTGHFCSGKIHCPECCVKKPDSKTPQYYHQLLACCLVKPDKKEVLPLMPEPIIQQQDASKNDCEKTAL
KRLLANISREHPHLKLVLNFDDLYSDGPTIKLMQSYGYSFIMVAKDTSHVSLYESVDELDKAGKVKRYHYTDENGYQHWFRFVNGVSINKSHKETLVNYL
EYVETDPKGNKYINTWITDIQLTEENVVKVMRGGRARWKIENETFNTLKTQGYHLEHNYGHGKQHLATNLACLTFTAFLINQIEQLACKFFQQALEAKKS
KKALWLGIRGLFDWFTIDNWEDLFTAIIEGRSVSLKHLVVDTT

 

Blast result :
Comments
ISEcret6 is 55% aa similar to ISMae2.
References
1]Helena Seth-Smith (2015) Direct submission.