ISEcret3

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KP890204 ND Endozoicomonas endosymbiont
Endozoicomonas endosymbiont of Diplodus puntazzo
DNA section
IS Length : 1332 bp

Ends


IR Length : 18/26

IRL : GGCTCTTTTGAAAAGTGAGTGGGTAACGCTGTATTCTTAATCCAATACTC
IRR : GGTTCTTTTTAATTTCATGTGGGTAAGCAGGCTTTGCTCACCTTGGTAAA

Insertion site


Left flankDirect repeatRight flankDR Length
GCTTCCAGTAAAAACTTTCTGAATCATT8

DNA sequence

GGCTCTTTTGAAAAGTGAGTGGGTAACGCTGTATTCTTAATCCAATACTCTGCATGACATCACAGGCCTGAAGACACTCATGGAAGAATTGTTTCAGAAT
GCCCTTGGAATCAGTTATCCCTGGTACATTGAGTCAATTGAGTTCAATACTGAACAATCCAGATTGGATATTTTTCTTAACTTTCAGCGAGGGGCAACCT
TCAAAGATAACAGTGAGGATGATCCTTCTGGCAAGGAGTACCCAGCATACGATACCTTTCAGAAAGAATGGCGGCATATGAACTTCTTTCAACATGAATG
TTATCTTCATGCACGCGTACCAAGGATCGAGCGGGATGATGGGAAGTTCCGCCTGATCCCTCCTCCCTGGAGTGGCAAACTCAAAGGGCTCACACTTCTA
TTTGAAGCTTTTCTGATACAGATGTGTCGCTCAATGCCTGTAAATCACGTCAGCAAGTTAACCGGAGTATCTAATTATCGACTGTGGACCCTGCTTGAAC
TTTACGTCAACGCAGCCAGATTTGATGAAGATTACAGTGAACTCCATGCCATTGGTATGGATGAAACATCAGCAGACCGAGGCCATGACTACATAACCCT
CTTTGTAGATCTTGAAGAGAAAAAGACAATCTTTGTCACTGATGGTAAAGGTAGTGAAACAGTCAGTGAATTTGCTGACGATCTTCTGGAACACAACGGT
AAACCGGAGCAGATCAAACAGGTCAGCTGTGACATGTCTCCCGCATTTATTAAAGGGGTTCGGGAAAAACTCACAGAGGCTGAAATAACTTTTGATAAAT
TCCACATCATCAAAATTATCAATGGCGCGGTTGACAGAGTGCGCCGGGAAGAGGCCAAAACAAACCCGTTGCTTACAGGTGCCCGTTACGTCTTGCTGAA
AAACGAAAACAACCTGACAGCGAAGCAGAAAACCATTCGTGAAAGGCTCTGCCTTCCTGGGCTCAACCTGAAATCTGTGCGAGCCCTTCAAATCAGGGAG
ACCTTTCAGCAGCTATATACCACGACCAGCTGTGAAGAGTTTGAGGCAAGGTTGAAGCAATGGTACTTTTGGGCAACTCACAGCAAGTTAGAGCCAATAA
TTAAAGCTGCCAAGATCATAAAACGACACTGGGATGGTGTTTTAAACTGGAAAAATAGCCAGATCAATAATGGTTTACTCGAAGGCTTGAATTCAGTTAT
TCAGGCAGCCAAGCGAAAAGCAAGGGGGTATAAAAAGCCTCACTTCAAAATCATGGTATATCTGCTGACAGGTAAGCTGGACTTTACCAAGGTGAGCAAA
GCCTGCTTACCCACATGAAATTAAAAAGAACC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1239 bp412 aa801318+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MEELFQNALGISYPWYIESIEFNTEQSRLDIFLNFQRGATFKDNSEDDPSGKEYPAYDTFQKEWRHMNFFQHECYLHARVPRIERDDGKFRLIPPPWSGK
LKGLTLLFEAFLIQMCRSMPVNHVSKLTGVSNYRLWTLLELYVNAARFDEDYSELHAIGMDETSADRGHDYITLFVDLEEKKTIFVTDGKGSETVSEFAD
DLLEHNGKPEQIKQVSCDMSPAFIKGVREKLTEAEITFDKFHIIKIINGAVDRVRREEAKTNPLLTGARYVLLKNENNLTAKQKTIRERLCLPGLNLKSV
RALQIRETFQQLYTTTSCEEFEARLKQWYFWATHSKLEPIIKAAKIIKRHWDGVLNWKNSQINNGLLEGLNSVIQAAKRKARGYKKPHFKIMVYLLTGKL
DFTKVSKACLPT

 

Blast result :
Comments
ISEcret3 is 67% aa similar to ISMac21.
References
1] Helena Seth-Smith (2015) Direct submission.