ISEcret3
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
KP890204 | ND | Endozoicomonas endosymbiont | Endozoicomonas endosymbiont of Diplodus puntazzo |
DNA section
IS Length : 1332 bp
Ends
IR Length : 18/26
IRL : GGCTCTTTTGAAAAGTGAGTGGGTAACGCTGTATTCTTAATCCAATACTC
IRR : GGTTCTTTTTAATTTCATGTGGGTAAGCAGGCTTTGCTCACCTTGGTAAA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GCTTCCAGTA | AAAACTTT | CTGAATCATT | 8 |
DNA sequence
GGCTCTTTTGAAAAGTGAGTGGGTAACGCTGTATTCTTAATCCAATACTCTGCATGACATCACAGGCCTGAAGACACTCATGGAAGAATTGTTTCAGAAT
GCCCTTGGAATCAGTTATCCCTGGTACATTGAGTCAATTGAGTTCAATACTGAACAATCCAGATTGGATATTTTTCTTAACTTTCAGCGAGGGGCAACCT
TCAAAGATAACAGTGAGGATGATCCTTCTGGCAAGGAGTACCCAGCATACGATACCTTTCAGAAAGAATGGCGGCATATGAACTTCTTTCAACATGAATG
TTATCTTCATGCACGCGTACCAAGGATCGAGCGGGATGATGGGAAGTTCCGCCTGATCCCTCCTCCCTGGAGTGGCAAACTCAAAGGGCTCACACTTCTA
TTTGAAGCTTTTCTGATACAGATGTGTCGCTCAATGCCTGTAAATCACGTCAGCAAGTTAACCGGAGTATCTAATTATCGACTGTGGACCCTGCTTGAAC
TTTACGTCAACGCAGCCAGATTTGATGAAGATTACAGTGAACTCCATGCCATTGGTATGGATGAAACATCAGCAGACCGAGGCCATGACTACATAACCCT
CTTTGTAGATCTTGAAGAGAAAAAGACAATCTTTGTCACTGATGGTAAAGGTAGTGAAACAGTCAGTGAATTTGCTGACGATCTTCTGGAACACAACGGT
AAACCGGAGCAGATCAAACAGGTCAGCTGTGACATGTCTCCCGCATTTATTAAAGGGGTTCGGGAAAAACTCACAGAGGCTGAAATAACTTTTGATAAAT
TCCACATCATCAAAATTATCAATGGCGCGGTTGACAGAGTGCGCCGGGAAGAGGCCAAAACAAACCCGTTGCTTACAGGTGCCCGTTACGTCTTGCTGAA
AAACGAAAACAACCTGACAGCGAAGCAGAAAACCATTCGTGAAAGGCTCTGCCTTCCTGGGCTCAACCTGAAATCTGTGCGAGCCCTTCAAATCAGGGAG
ACCTTTCAGCAGCTATATACCACGACCAGCTGTGAAGAGTTTGAGGCAAGGTTGAAGCAATGGTACTTTTGGGCAACTCACAGCAAGTTAGAGCCAATAA
TTAAAGCTGCCAAGATCATAAAACGACACTGGGATGGTGTTTTAAACTGGAAAAATAGCCAGATCAATAATGGTTTACTCGAAGGCTTGAATTCAGTTAT
TCAGGCAGCCAAGCGAAAAGCAAGGGGGTATAAAAAGCCTCACTTCAAAATCATGGTATATCTGCTGACAGGTAAGCTGGACTTTACCAAGGTGAGCAAA
GCCTGCTTACCCACATGAAATTAAAAAGAACC
GCCCTTGGAATCAGTTATCCCTGGTACATTGAGTCAATTGAGTTCAATACTGAACAATCCAGATTGGATATTTTTCTTAACTTTCAGCGAGGGGCAACCT
TCAAAGATAACAGTGAGGATGATCCTTCTGGCAAGGAGTACCCAGCATACGATACCTTTCAGAAAGAATGGCGGCATATGAACTTCTTTCAACATGAATG
TTATCTTCATGCACGCGTACCAAGGATCGAGCGGGATGATGGGAAGTTCCGCCTGATCCCTCCTCCCTGGAGTGGCAAACTCAAAGGGCTCACACTTCTA
TTTGAAGCTTTTCTGATACAGATGTGTCGCTCAATGCCTGTAAATCACGTCAGCAAGTTAACCGGAGTATCTAATTATCGACTGTGGACCCTGCTTGAAC
TTTACGTCAACGCAGCCAGATTTGATGAAGATTACAGTGAACTCCATGCCATTGGTATGGATGAAACATCAGCAGACCGAGGCCATGACTACATAACCCT
CTTTGTAGATCTTGAAGAGAAAAAGACAATCTTTGTCACTGATGGTAAAGGTAGTGAAACAGTCAGTGAATTTGCTGACGATCTTCTGGAACACAACGGT
AAACCGGAGCAGATCAAACAGGTCAGCTGTGACATGTCTCCCGCATTTATTAAAGGGGTTCGGGAAAAACTCACAGAGGCTGAAATAACTTTTGATAAAT
TCCACATCATCAAAATTATCAATGGCGCGGTTGACAGAGTGCGCCGGGAAGAGGCCAAAACAAACCCGTTGCTTACAGGTGCCCGTTACGTCTTGCTGAA
AAACGAAAACAACCTGACAGCGAAGCAGAAAACCATTCGTGAAAGGCTCTGCCTTCCTGGGCTCAACCTGAAATCTGTGCGAGCCCTTCAAATCAGGGAG
ACCTTTCAGCAGCTATATACCACGACCAGCTGTGAAGAGTTTGAGGCAAGGTTGAAGCAATGGTACTTTTGGGCAACTCACAGCAAGTTAGAGCCAATAA
TTAAAGCTGCCAAGATCATAAAACGACACTGGGATGGTGTTTTAAACTGGAAAAATAGCCAGATCAATAATGGTTTACTCGAAGGCTTGAATTCAGTTAT
TCAGGCAGCCAAGCGAAAAGCAAGGGGGTATAAAAAGCCTCACTTCAAAATCATGGTATATCTGCTGACAGGTAAGCTGGACTTTACCAAGGTGAGCAAA
GCCTGCTTACCCACATGAAATTAAAAAGAACC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1239 bp | 412 aa | 80 | 1318 | + | No |
Chemistry : Unknow
ORF sequence :
MEELFQNALGISYPWYIESIEFNTEQSRLDIFLNFQRGATFKDNSEDDPSGKEYPAYDTFQKEWRHMNFFQHECYLHARVPRIERDDGKFRLIPPPWSGK
LKGLTLLFEAFLIQMCRSMPVNHVSKLTGVSNYRLWTLLELYVNAARFDEDYSELHAIGMDETSADRGHDYITLFVDLEEKKTIFVTDGKGSETVSEFAD
DLLEHNGKPEQIKQVSCDMSPAFIKGVREKLTEAEITFDKFHIIKIINGAVDRVRREEAKTNPLLTGARYVLLKNENNLTAKQKTIRERLCLPGLNLKSV
RALQIRETFQQLYTTTSCEEFEARLKQWYFWATHSKLEPIIKAAKIIKRHWDGVLNWKNSQINNGLLEGLNSVIQAAKRKARGYKKPHFKIMVYLLTGKL
DFTKVSKACLPT
LKGLTLLFEAFLIQMCRSMPVNHVSKLTGVSNYRLWTLLELYVNAARFDEDYSELHAIGMDETSADRGHDYITLFVDLEEKKTIFVTDGKGSETVSEFAD
DLLEHNGKPEQIKQVSCDMSPAFIKGVREKLTEAEITFDKFHIIKIINGAVDRVRREEAKTNPLLTGARYVLLKNENNLTAKQKTIRERLCLPGLNLKSV
RALQIRETFQQLYTTTSCEEFEARLKQWYFWATHSKLEPIIKAAKIIKRHWDGVLNWKNSQINNGLLEGLNSVIQAAKRKARGYKKPHFKIMVYLLTGKL
DFTKVSKACLPT
Blast result :
Comments
ISEcret3 is 67% aa similar to ISMac21.
References
1] Helena Seth-Smith (2015) Direct submission.