ISEcret2
- Family IS701
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
KP890197 | ND | Endozoicomonas endosymbiont | Endozoicomonas endosymbiont of Diplodus puntazzo |
DNA section
IS Length : 1535 bp
Ends
IR Length : 16
IRL : CTCAGCTTTAGAGCTTCACTGGTACATTCGATTTAATTTTTATATGAGTT
IRR : CTCAGCTTTAGAGCTTAGGTATTACGGACGTTTGAGAAGTTTATTTCTGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ACGACACTGTTG | GAACTGGTA | TAAACCAGTCGT | 9 |
DNA sequence
CTCAGCTTTAGAGCTTCACTGGTACATTCGATTTAATTTTTATATGAGTTAAACCAACCGTCACACATAATAAATCCAGGCGGTTGTGATGTACTCTTTA
GAACAAACAAAAATATTAAAAGAACTTTCGTTCTATATTACTTTCCTTACCAGAGCTGTTTCTGCGAAAGCTGCACCAGTGTTTTGCGAATTGCTCATTG
GTAGCATGCTCTCCGGTGAGGGGTTCCTGACTCAGGCTCTGCTTGCCATCCAGTACGATAAAGTCTGGAGCAGCTATCATCATTGGGTTGCCTTCGGGTG
CTGGCGTTGGCGAAATCTTGCTCATCAACTGACACTGTTAGTCAGTTCCAAAGCACCTGAAGAGGAACCGGTTCCCGTTATTCTCGATGACCTGATCCTT
GAGCGTTGTTCAGAGAACGCGCCTGCCTGTCGCATCCACCGACAGCACAGCCAGAAAAAGAACCGTGCGAAGTATCTTCTTGGGCAATGCTGGGTATTTC
TTGCCATTGCCTTTAAGCGACCTTCTGATGGCGTCAATACAGCGGTTCCTGTTATGGCATTTCCAGCACCAAAATCAGGAAATGTCAGCAAGCTGAAGAT
CGCCAGATGCATGCTGACGTCTCTTCGTAAGACTCTCGCTCATCGCACAATACGAATACTGACTGATAGTTGGTTTATGAACAAAACAATGATGCTGCCA
GCACTTGATCAGGAGTTTGAAATCATCGGCAATATTCCTAAAAACAGGGCTCTGTTCGCTCTGCCGGTGGAAGCATTACCACCTTCACCCATTAAGAAAA
GAGGTAGAAAACGTATATATGGAGTGAAAATGACTCCGGAAGAAGTCCAAAAACTACCAGAAACGACAATGACCTTACGACTTTACGGCAAAGAACGCGA
TGTTGCTTTTCGATCATGTATCTGTCGTGCCCGCTTCCTGAAAGGACGTATTGTTCGTGTGGTATGGAGTTCATTTGTCAACGACAAAGGAAAGACAGAG
TGCCGACTATTCCTGTCAACCAATCCGGAGCTGAAGGCCTCTGAGATATTGGAAATTTATTCCATGCGGTGGCCAATAGAGTCGATGTTTCAGCAGATGA
AGTACCAGTTTGGCTGCAAAAACCTGTGGCAACAAAAGCTCAGAACACTGCTACGCTGGATGCACATTAAAATGGCCGGTTATGCCTTGCTGCAACTGTT
GACCATATGCATGAATACCGTAGCACTGAAAGTGGCCAGAATTGATTGGCGTAAAATGGATACGGTAACTGCCGGGATGGTCAGGCAAGCTCTGAAATTA
ATTATTCCCCGGTTCACGATTCGTGGCTGCTGGAACCGATATGAGCAAAAATTAGAACTGATTTCAAATAACCAGCACGAACGAACATTAAGCTCGAAAC
CCAGAGCAGCATAGACTGCTTGTAGAGTCGGTAATATAAGAGAATTGGCCAGTTCAGAAGTTACACTGGAAATGCTTTATTAATTTCAGAAATAAACTTC
TCAAACGTCCGTAATACCTAAGCTCTAAAGCTGAG
GAACAAACAAAAATATTAAAAGAACTTTCGTTCTATATTACTTTCCTTACCAGAGCTGTTTCTGCGAAAGCTGCACCAGTGTTTTGCGAATTGCTCATTG
GTAGCATGCTCTCCGGTGAGGGGTTCCTGACTCAGGCTCTGCTTGCCATCCAGTACGATAAAGTCTGGAGCAGCTATCATCATTGGGTTGCCTTCGGGTG
CTGGCGTTGGCGAAATCTTGCTCATCAACTGACACTGTTAGTCAGTTCCAAAGCACCTGAAGAGGAACCGGTTCCCGTTATTCTCGATGACCTGATCCTT
GAGCGTTGTTCAGAGAACGCGCCTGCCTGTCGCATCCACCGACAGCACAGCCAGAAAAAGAACCGTGCGAAGTATCTTCTTGGGCAATGCTGGGTATTTC
TTGCCATTGCCTTTAAGCGACCTTCTGATGGCGTCAATACAGCGGTTCCTGTTATGGCATTTCCAGCACCAAAATCAGGAAATGTCAGCAAGCTGAAGAT
CGCCAGATGCATGCTGACGTCTCTTCGTAAGACTCTCGCTCATCGCACAATACGAATACTGACTGATAGTTGGTTTATGAACAAAACAATGATGCTGCCA
GCACTTGATCAGGAGTTTGAAATCATCGGCAATATTCCTAAAAACAGGGCTCTGTTCGCTCTGCCGGTGGAAGCATTACCACCTTCACCCATTAAGAAAA
GAGGTAGAAAACGTATATATGGAGTGAAAATGACTCCGGAAGAAGTCCAAAAACTACCAGAAACGACAATGACCTTACGACTTTACGGCAAAGAACGCGA
TGTTGCTTTTCGATCATGTATCTGTCGTGCCCGCTTCCTGAAAGGACGTATTGTTCGTGTGGTATGGAGTTCATTTGTCAACGACAAAGGAAAGACAGAG
TGCCGACTATTCCTGTCAACCAATCCGGAGCTGAAGGCCTCTGAGATATTGGAAATTTATTCCATGCGGTGGCCAATAGAGTCGATGTTTCAGCAGATGA
AGTACCAGTTTGGCTGCAAAAACCTGTGGCAACAAAAGCTCAGAACACTGCTACGCTGGATGCACATTAAAATGGCCGGTTATGCCTTGCTGCAACTGTT
GACCATATGCATGAATACCGTAGCACTGAAAGTGGCCAGAATTGATTGGCGTAAAATGGATACGGTAACTGCCGGGATGGTCAGGCAAGCTCTGAAATTA
ATTATTCCCCGGTTCACGATTCGTGGCTGCTGGAACCGATATGAGCAAAAATTAGAACTGATTTCAAATAACCAGCACGAACGAACATTAAGCTCGAAAC
CCAGAGCAGCATAGACTGCTTGTAGAGTCGGTAATATAAGAGAATTGGCCAGTTCAGAAGTTACACTGGAAATGCTTTATTAATTTCAGAAATAAACTTC
TCAAACGTCCGTAATACCTAAGCTCTAAAGCTGAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1326 bp | 441 aa | 89 | 1414 | + | No |
Chemistry : DDE
ORF sequence :
MYSLEQTKILKELSFYITFLTRAVSAKAAPVFCELLIGSMLSGEGFLTQALLAIQYDKVWSSYHHWVAFGCWRWRNLAHQLTLLVSSKAPEEEPVPVILD
DLILERCSENAPACRIHRQHSQKKNRAKYLLGQCWVFLAIAFKRPSDGVNTAVPVMAFPAPKSGNVSKLKIARCMLTSLRKTLAHRTIRILTDSWFMNKT
MMLPALDQEFEIIGNIPKNRALFALPVEALPPSPIKKRGRKRIYGVKMTPEEVQKLPETTMTLRLYGKERDVAFRSCICRARFLKGRIVRVVWSSFVNDK
GKTECRLFLSTNPELKASEILEIYSMRWPIESMFQQMKYQFGCKNLWQQKLRTLLRWMHIKMAGYALLQLLTICMNTVALKVARIDWRKMDTVTAGMVRQ
ALKLIIPRFTIRGCWNRYEQKLELISNNQHERTLSSKPRAA
DLILERCSENAPACRIHRQHSQKKNRAKYLLGQCWVFLAIAFKRPSDGVNTAVPVMAFPAPKSGNVSKLKIARCMLTSLRKTLAHRTIRILTDSWFMNKT
MMLPALDQEFEIIGNIPKNRALFALPVEALPPSPIKKRGRKRIYGVKMTPEEVQKLPETTMTLRLYGKERDVAFRSCICRARFLKGRIVRVVWSSFVNDK
GKTECRLFLSTNPELKASEILEIYSMRWPIESMFQQMKYQFGCKNLWQQKLRTLLRWMHIKMAGYALLQLLTICMNTVALKVARIDWRKMDTVTAGMVRQ
ALKLIIPRFTIRGCWNRYEQKLELISNNQHERTLSSKPRAA
Blast result :
Comments
ISEcret2 is 57% aa similar to ISAfd1.
References
1] Helena Seth-Smith (2015) Direct submission.