ISEcret2

  • Family IS701
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KP890197 ND Endozoicomonas endosymbiont
Endozoicomonas endosymbiont of Diplodus puntazzo
DNA section
IS Length : 1535 bp

Ends


IR Length : 16

IRL : CTCAGCTTTAGAGCTTCACTGGTACATTCGATTTAATTTTTATATGAGTT
IRR : CTCAGCTTTAGAGCTTAGGTATTACGGACGTTTGAGAAGTTTATTTCTGA

Insertion site


Left flankDirect repeatRight flankDR Length
ACGACACTGTTGGAACTGGTATAAACCAGTCGT9

DNA sequence

CTCAGCTTTAGAGCTTCACTGGTACATTCGATTTAATTTTTATATGAGTTAAACCAACCGTCACACATAATAAATCCAGGCGGTTGTGATGTACTCTTTA
GAACAAACAAAAATATTAAAAGAACTTTCGTTCTATATTACTTTCCTTACCAGAGCTGTTTCTGCGAAAGCTGCACCAGTGTTTTGCGAATTGCTCATTG
GTAGCATGCTCTCCGGTGAGGGGTTCCTGACTCAGGCTCTGCTTGCCATCCAGTACGATAAAGTCTGGAGCAGCTATCATCATTGGGTTGCCTTCGGGTG
CTGGCGTTGGCGAAATCTTGCTCATCAACTGACACTGTTAGTCAGTTCCAAAGCACCTGAAGAGGAACCGGTTCCCGTTATTCTCGATGACCTGATCCTT
GAGCGTTGTTCAGAGAACGCGCCTGCCTGTCGCATCCACCGACAGCACAGCCAGAAAAAGAACCGTGCGAAGTATCTTCTTGGGCAATGCTGGGTATTTC
TTGCCATTGCCTTTAAGCGACCTTCTGATGGCGTCAATACAGCGGTTCCTGTTATGGCATTTCCAGCACCAAAATCAGGAAATGTCAGCAAGCTGAAGAT
CGCCAGATGCATGCTGACGTCTCTTCGTAAGACTCTCGCTCATCGCACAATACGAATACTGACTGATAGTTGGTTTATGAACAAAACAATGATGCTGCCA
GCACTTGATCAGGAGTTTGAAATCATCGGCAATATTCCTAAAAACAGGGCTCTGTTCGCTCTGCCGGTGGAAGCATTACCACCTTCACCCATTAAGAAAA
GAGGTAGAAAACGTATATATGGAGTGAAAATGACTCCGGAAGAAGTCCAAAAACTACCAGAAACGACAATGACCTTACGACTTTACGGCAAAGAACGCGA
TGTTGCTTTTCGATCATGTATCTGTCGTGCCCGCTTCCTGAAAGGACGTATTGTTCGTGTGGTATGGAGTTCATTTGTCAACGACAAAGGAAAGACAGAG
TGCCGACTATTCCTGTCAACCAATCCGGAGCTGAAGGCCTCTGAGATATTGGAAATTTATTCCATGCGGTGGCCAATAGAGTCGATGTTTCAGCAGATGA
AGTACCAGTTTGGCTGCAAAAACCTGTGGCAACAAAAGCTCAGAACACTGCTACGCTGGATGCACATTAAAATGGCCGGTTATGCCTTGCTGCAACTGTT
GACCATATGCATGAATACCGTAGCACTGAAAGTGGCCAGAATTGATTGGCGTAAAATGGATACGGTAACTGCCGGGATGGTCAGGCAAGCTCTGAAATTA
ATTATTCCCCGGTTCACGATTCGTGGCTGCTGGAACCGATATGAGCAAAAATTAGAACTGATTTCAAATAACCAGCACGAACGAACATTAAGCTCGAAAC
CCAGAGCAGCATAGACTGCTTGTAGAGTCGGTAATATAAGAGAATTGGCCAGTTCAGAAGTTACACTGGAAATGCTTTATTAATTTCAGAAATAAACTTC
TCAAACGTCCGTAATACCTAAGCTCTAAAGCTGAG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1326 bp441 aa891414+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MYSLEQTKILKELSFYITFLTRAVSAKAAPVFCELLIGSMLSGEGFLTQALLAIQYDKVWSSYHHWVAFGCWRWRNLAHQLTLLVSSKAPEEEPVPVILD
DLILERCSENAPACRIHRQHSQKKNRAKYLLGQCWVFLAIAFKRPSDGVNTAVPVMAFPAPKSGNVSKLKIARCMLTSLRKTLAHRTIRILTDSWFMNKT
MMLPALDQEFEIIGNIPKNRALFALPVEALPPSPIKKRGRKRIYGVKMTPEEVQKLPETTMTLRLYGKERDVAFRSCICRARFLKGRIVRVVWSSFVNDK
GKTECRLFLSTNPELKASEILEIYSMRWPIESMFQQMKYQFGCKNLWQQKLRTLLRWMHIKMAGYALLQLLTICMNTVALKVARIDWRKMDTVTAGMVRQ
ALKLIIPRFTIRGCWNRYEQKLELISNNQHERTLSSKPRAA

 

Blast result :
Comments
ISEcret2 is 57% aa similar to ISAfd1.
References
1] Helena Seth-Smith (2015) Direct submission.