ISEcret1
- Family IS1634
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
KP890196 | ND | Endozoicomonas endosymbiont | Endozoicomonas endosymbiont of Diplodus puntazzo |
DNA section
IS Length : 1731 bp
Ends
IR Length : 18/20
IRL : CTGTCTTTCACCACACCAATTGATATTTTCCTGAAACCTGTTGTCAAAGG
IRR : CTGTCTTTCACCACCCCTATCAGGAATAAACCGATTCGTAAGAAATGCCT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTTGTGGACAACT | TTGTCT | TTAAAACTCTGG | 6 |
GCGCTGGATGGGG | CTGTTAA | CAAAATTTCCCG | 7 |
DNA sequence
CTGTCTTTCACCACACCAATTGATATTTTCCTGAAACCTGTTGTCAAAGGACTGATCAGATATTCAGGGATATTGTTTTGCCACCTTTTCAATACCAGTT
CAAAAGCCTGAACCACCTTGGCTTAGTTGCTGCGATGTGCCGGGAACTGAAGATAGCCGAATATATTGATGCGCGCATAACCAATGACTCCGATGTACGT
AATGTCACGATTGGACAGGCTGTGGTCGCAATGATCATCAATGGGCTGGGCTTTACAGGACAGACTCTGTATATGTTTCCTGATTTTTATGAGGACAAGC
CGATCGATCGGCTCATTGGCGAAGGCATCCAGGCTGAACATTTGAACGACAAGGTACTGGGTCGAGCCCTCGACAGCCTTTACGACGCTGGCGTCAGTGA
CTTGTATCTGCACCTTGCTATTAAGGTCGTTAATCATCTGAAGCTGCCCTGCAAGGCATTAAATCTGGACGGCACCAGCTTTCATGTGGATGGTGACTAC
AACAGTAATAACGACCCTGATGACTTGAAGTGTATCCATATCTGCCGCGGTTACAGCCGCGACCACCGGCCTGATCTGAACCAGGTGGTCTTGCAGTTAA
TGACCGAAAATGAGGCCGGTATTCCTGTGTTCATGGCGCCTGCCAGCGGTAATGTGAACGATAAAACCTGCTTTCAGGAGATTATCAAAAACCATCTGTC
GTGTTTCAGGGCTGCTTTGAATAGCCGCTACCTGGTCGCTGATGCCGCCCTGTACGTTGCTGAAACCCTTCAGTTACTTGATGATCAAAAACAGCGGTTT
ATCTCCCGGGTGCCTTTGAATATCAAGGATGCAAAGCAACTGGTCGGCAAAGCGTCTGCTGTATCGCTGAAGCCTGTTGAAGGCTATGAAGATTATTACT
TTGCACAAGTGCCTTCCACCTATGGAGATGTTCAACAACGATGGTTCTTGTTTCTCAATAAAAAGCGTCGACTGAGCGAGCAGAAAACGCTGATAAGAAA
GATGGAGAAACAGTCACTGAAAGAGGCTCGTGACCTGGAAAAGCTGCGTAAAAAGGCTTTTCTTTGCGAAGACGATGCATTGCAGGCTTTTGCCTTATGG
CAGAAACAGTCGAAGCTCTGCCAGAGTGGATCGGAACCTGAGGTTATCCGCAAACCCTGCTATTCAGGCAAGGGGCGTCCACCGTCAGACAGTAAACCTG
ATCACTTCGAATATTTTGTCCATGGCGTATGTTTTGTTGCCTGCGAGAAAAAGGAGCATGCACAGGCCTCATTGGGCTACTTTATCCTGAGCACCAATGA
GCTGGATCAGAACCGTCTGCATGCCGGTGAGCTGTTATCTACATACAAGTCGCAACAACAGGTAGAAGGCGGCTTTCGTTTCCTGAAAAGCCCGGACTTT
CTGGTCTCTTCACTCTATCTGAAGAAACCGGAGCGCATTGAAGCGCTGTTGATGGTGATGACACTCTGCCTGATGGTCTATGCTGCTATCCAGCACAGAA
TAAGGTACGAACTGAAAAAGCGGAGTCGTGTGTTTCCAAACCAGAAAAAGAAGCCCTGCCAGAATCCAACAGCAAGATGGGTCTTCTTCTGCTTTCAGGG
GATTAATGTATTAACGGTCAATAATCAGGAACAGCATGTGGTCGGTTTGAAGGAAAAGCAGTGGACGATCATCCAAATTTTAGGCATTTCTTACGAATCG
GTTTATTCCTGATAGGGGTGGTGAAAGACAG
CAAAAGCCTGAACCACCTTGGCTTAGTTGCTGCGATGTGCCGGGAACTGAAGATAGCCGAATATATTGATGCGCGCATAACCAATGACTCCGATGTACGT
AATGTCACGATTGGACAGGCTGTGGTCGCAATGATCATCAATGGGCTGGGCTTTACAGGACAGACTCTGTATATGTTTCCTGATTTTTATGAGGACAAGC
CGATCGATCGGCTCATTGGCGAAGGCATCCAGGCTGAACATTTGAACGACAAGGTACTGGGTCGAGCCCTCGACAGCCTTTACGACGCTGGCGTCAGTGA
CTTGTATCTGCACCTTGCTATTAAGGTCGTTAATCATCTGAAGCTGCCCTGCAAGGCATTAAATCTGGACGGCACCAGCTTTCATGTGGATGGTGACTAC
AACAGTAATAACGACCCTGATGACTTGAAGTGTATCCATATCTGCCGCGGTTACAGCCGCGACCACCGGCCTGATCTGAACCAGGTGGTCTTGCAGTTAA
TGACCGAAAATGAGGCCGGTATTCCTGTGTTCATGGCGCCTGCCAGCGGTAATGTGAACGATAAAACCTGCTTTCAGGAGATTATCAAAAACCATCTGTC
GTGTTTCAGGGCTGCTTTGAATAGCCGCTACCTGGTCGCTGATGCCGCCCTGTACGTTGCTGAAACCCTTCAGTTACTTGATGATCAAAAACAGCGGTTT
ATCTCCCGGGTGCCTTTGAATATCAAGGATGCAAAGCAACTGGTCGGCAAAGCGTCTGCTGTATCGCTGAAGCCTGTTGAAGGCTATGAAGATTATTACT
TTGCACAAGTGCCTTCCACCTATGGAGATGTTCAACAACGATGGTTCTTGTTTCTCAATAAAAAGCGTCGACTGAGCGAGCAGAAAACGCTGATAAGAAA
GATGGAGAAACAGTCACTGAAAGAGGCTCGTGACCTGGAAAAGCTGCGTAAAAAGGCTTTTCTTTGCGAAGACGATGCATTGCAGGCTTTTGCCTTATGG
CAGAAACAGTCGAAGCTCTGCCAGAGTGGATCGGAACCTGAGGTTATCCGCAAACCCTGCTATTCAGGCAAGGGGCGTCCACCGTCAGACAGTAAACCTG
ATCACTTCGAATATTTTGTCCATGGCGTATGTTTTGTTGCCTGCGAGAAAAAGGAGCATGCACAGGCCTCATTGGGCTACTTTATCCTGAGCACCAATGA
GCTGGATCAGAACCGTCTGCATGCCGGTGAGCTGTTATCTACATACAAGTCGCAACAACAGGTAGAAGGCGGCTTTCGTTTCCTGAAAAGCCCGGACTTT
CTGGTCTCTTCACTCTATCTGAAGAAACCGGAGCGCATTGAAGCGCTGTTGATGGTGATGACACTCTGCCTGATGGTCTATGCTGCTATCCAGCACAGAA
TAAGGTACGAACTGAAAAAGCGGAGTCGTGTGTTTCCAAACCAGAAAAAGAAGCCCTGCCAGAATCCAACAGCAAGATGGGTCTTCTTCTGCTTTCAGGG
GATTAATGTATTAACGGTCAATAATCAGGAACAGCATGTGGTCGGTTTGAAGGAAAAGCAGTGGACGATCATCCAAATTTTAGGCATTTCTTACGAATCG
GTTTATTCCTGATAGGGGTGGTGAAAGACAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1635 bp | 544 aa | 78 | 1712 | + | No |
Chemistry : DDE
ORF sequence :
MPPFQYQFKSLNHLGLVAAMCRELKIAEYIDARITNDSDVRNVTIGQAVVAMIINGLGFTGQTLYMFPDFYEDKPIDRLIGEGIQAEHLNDKVLGRALDS
LYDAGVSDLYLHLAIKVVNHLKLPCKALNLDGTSFHVDGDYNSNNDPDDLKCIHICRGYSRDHRPDLNQVVLQLMTENEAGIPVFMAPASGNVNDKTCFQ
EIIKNHLSCFRAALNSRYLVADAALYVAETLQLLDDQKQRFISRVPLNIKDAKQLVGKASAVSLKPVEGYEDYYFAQVPSTYGDVQQRWFLFLNKKRRLS
EQKTLIRKMEKQSLKEARDLEKLRKKAFLCEDDALQAFALWQKQSKLCQSGSEPEVIRKPCYSGKGRPPSDSKPDHFEYFVHGVCFVACEKKEHAQASLG
YFILSTNELDQNRLHAGELLSTYKSQQQVEGGFRFLKSPDFLVSSLYLKKPERIEALLMVMTLCLMVYAAIQHRIRYELKKRSRVFPNQKKKPCQNPTAR
WVFFCFQGINVLTVNNQEQHVVGLKEKQWTIIQILGISYESVYS
LYDAGVSDLYLHLAIKVVNHLKLPCKALNLDGTSFHVDGDYNSNNDPDDLKCIHICRGYSRDHRPDLNQVVLQLMTENEAGIPVFMAPASGNVNDKTCFQ
EIIKNHLSCFRAALNSRYLVADAALYVAETLQLLDDQKQRFISRVPLNIKDAKQLVGKASAVSLKPVEGYEDYYFAQVPSTYGDVQQRWFLFLNKKRRLS
EQKTLIRKMEKQSLKEARDLEKLRKKAFLCEDDALQAFALWQKQSKLCQSGSEPEVIRKPCYSGKGRPPSDSKPDHFEYFVHGVCFVACEKKEHAQASLG
YFILSTNELDQNRLHAGELLSTYKSQQQVEGGFRFLKSPDFLVSSLYLKKPERIEALLMVMTLCLMVYAAIQHRIRYELKKRSRVFPNQKKKPCQNPTAR
WVFFCFQGINVLTVNNQEQHVVGLKEKQWTIIQILGISYESVYS
Blast result :
Comments
ISEcret1 is 67% aa similar to ISVa17.
References
1] Helena Seth-Smith (2015) Direct submission.