ISEcret1

  • Family IS1634
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KP890196 ND Endozoicomonas endosymbiont
Endozoicomonas endosymbiont of Diplodus puntazzo
DNA section
IS Length : 1731 bp

Ends


IR Length : 18/20

IRL : CTGTCTTTCACCACACCAATTGATATTTTCCTGAAACCTGTTGTCAAAGG
IRR : CTGTCTTTCACCACCCCTATCAGGAATAAACCGATTCGTAAGAAATGCCT

Insertion site


Left flankDirect repeatRight flankDR Length
CTTGTGGACAACTTTGTCTTTAAAACTCTGG6
GCGCTGGATGGGGCTGTTAACAAAATTTCCCG7

DNA sequence

CTGTCTTTCACCACACCAATTGATATTTTCCTGAAACCTGTTGTCAAAGGACTGATCAGATATTCAGGGATATTGTTTTGCCACCTTTTCAATACCAGTT
CAAAAGCCTGAACCACCTTGGCTTAGTTGCTGCGATGTGCCGGGAACTGAAGATAGCCGAATATATTGATGCGCGCATAACCAATGACTCCGATGTACGT
AATGTCACGATTGGACAGGCTGTGGTCGCAATGATCATCAATGGGCTGGGCTTTACAGGACAGACTCTGTATATGTTTCCTGATTTTTATGAGGACAAGC
CGATCGATCGGCTCATTGGCGAAGGCATCCAGGCTGAACATTTGAACGACAAGGTACTGGGTCGAGCCCTCGACAGCCTTTACGACGCTGGCGTCAGTGA
CTTGTATCTGCACCTTGCTATTAAGGTCGTTAATCATCTGAAGCTGCCCTGCAAGGCATTAAATCTGGACGGCACCAGCTTTCATGTGGATGGTGACTAC
AACAGTAATAACGACCCTGATGACTTGAAGTGTATCCATATCTGCCGCGGTTACAGCCGCGACCACCGGCCTGATCTGAACCAGGTGGTCTTGCAGTTAA
TGACCGAAAATGAGGCCGGTATTCCTGTGTTCATGGCGCCTGCCAGCGGTAATGTGAACGATAAAACCTGCTTTCAGGAGATTATCAAAAACCATCTGTC
GTGTTTCAGGGCTGCTTTGAATAGCCGCTACCTGGTCGCTGATGCCGCCCTGTACGTTGCTGAAACCCTTCAGTTACTTGATGATCAAAAACAGCGGTTT
ATCTCCCGGGTGCCTTTGAATATCAAGGATGCAAAGCAACTGGTCGGCAAAGCGTCTGCTGTATCGCTGAAGCCTGTTGAAGGCTATGAAGATTATTACT
TTGCACAAGTGCCTTCCACCTATGGAGATGTTCAACAACGATGGTTCTTGTTTCTCAATAAAAAGCGTCGACTGAGCGAGCAGAAAACGCTGATAAGAAA
GATGGAGAAACAGTCACTGAAAGAGGCTCGTGACCTGGAAAAGCTGCGTAAAAAGGCTTTTCTTTGCGAAGACGATGCATTGCAGGCTTTTGCCTTATGG
CAGAAACAGTCGAAGCTCTGCCAGAGTGGATCGGAACCTGAGGTTATCCGCAAACCCTGCTATTCAGGCAAGGGGCGTCCACCGTCAGACAGTAAACCTG
ATCACTTCGAATATTTTGTCCATGGCGTATGTTTTGTTGCCTGCGAGAAAAAGGAGCATGCACAGGCCTCATTGGGCTACTTTATCCTGAGCACCAATGA
GCTGGATCAGAACCGTCTGCATGCCGGTGAGCTGTTATCTACATACAAGTCGCAACAACAGGTAGAAGGCGGCTTTCGTTTCCTGAAAAGCCCGGACTTT
CTGGTCTCTTCACTCTATCTGAAGAAACCGGAGCGCATTGAAGCGCTGTTGATGGTGATGACACTCTGCCTGATGGTCTATGCTGCTATCCAGCACAGAA
TAAGGTACGAACTGAAAAAGCGGAGTCGTGTGTTTCCAAACCAGAAAAAGAAGCCCTGCCAGAATCCAACAGCAAGATGGGTCTTCTTCTGCTTTCAGGG
GATTAATGTATTAACGGTCAATAATCAGGAACAGCATGTGGTCGGTTTGAAGGAAAAGCAGTGGACGATCATCCAAATTTTAGGCATTTCTTACGAATCG
GTTTATTCCTGATAGGGGTGGTGAAAGACAG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1635 bp544 aa781712+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MPPFQYQFKSLNHLGLVAAMCRELKIAEYIDARITNDSDVRNVTIGQAVVAMIINGLGFTGQTLYMFPDFYEDKPIDRLIGEGIQAEHLNDKVLGRALDS
LYDAGVSDLYLHLAIKVVNHLKLPCKALNLDGTSFHVDGDYNSNNDPDDLKCIHICRGYSRDHRPDLNQVVLQLMTENEAGIPVFMAPASGNVNDKTCFQ
EIIKNHLSCFRAALNSRYLVADAALYVAETLQLLDDQKQRFISRVPLNIKDAKQLVGKASAVSLKPVEGYEDYYFAQVPSTYGDVQQRWFLFLNKKRRLS
EQKTLIRKMEKQSLKEARDLEKLRKKAFLCEDDALQAFALWQKQSKLCQSGSEPEVIRKPCYSGKGRPPSDSKPDHFEYFVHGVCFVACEKKEHAQASLG
YFILSTNELDQNRLHAGELLSTYKSQQQVEGGFRFLKSPDFLVSSLYLKKPERIEALLMVMTLCLMVYAAIQHRIRYELKKRSRVFPNQKKKPCQNPTAR
WVFFCFQGINVLTVNNQEQHVVGLKEKQWTIIQILGISYESVYS

 

Blast result :
Comments
ISEcret1 is 67% aa similar to ISVa17.
References
1] Helena Seth-Smith (2015) Direct submission.