ISStrs1

  • Family IS200/IS605
  • Group IS200
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
FR873481.1 ND Streptococcus salivarius
Streptococcus salivarius CCHSS3
DNA section
IS Length : 746 bp

Ends


Left end : ATCTTACGAAAACCACTAGCTGTGCTAGTGGTTCCGAAAAGCTTTTAGCGATGTATCAAAAAAAGTCCCCCTAAAGTGTTATATTAGATAAGGTTTCCCG II struct. : Yes
Right end : GGTGCTGAAGGGGAACCATTCGGTAGGCCTTTAGGCCTCGGCCGGTAGCAGAGGCTTTCAGCCGAAGAGCAAGCCACCTGTTCTCACGGGTGGTTTTGAC II struct. : Yes

Insertion site


Left flankLE cleavage siteRight flankRE cleavage site
AGGTCTAGCTTTTTTTTTGTTTTTATCAGTTGAC

DNA sequence

ATCTTACGAAAACCACTAGCTGTGCTAGTGGTTCCGAAAAGCTTTTAGCGATGTATCAAAAAAAGTCCCCCTAAAGTGTTATATTAGATAAGGTTTCCCG
ACCACTAACTAATATACAAAAGGAGGCCCCCTGATGAGACAGGATAATAATAGTTTAGCACATACTACATGGAATTGTAAGTATCATATTGTTTTCGCCC
CAAAATATAGACGTCAGATAATCTATGGGAAATACAAAGCAAGTATTGGTCAAATCTTACGGTTATTATGTGAAAGAAAAGGCGTTGAAATTCATGAAGC
AGAAGCTTGCCCAGATCATATTCACATGTTAGTGAGTGAACCACCGAAACTAAGTATTTCTTCATTTATGGGATATTTAAAGGGTAAAAGTAGCTTAATG
ATATTCGACCGACACGCTAATTTAAAGTATAAATATGGGAATCGCAAATTTTGGTGTCGAGGCTTTTATGTTGATACGGTTGGGCGAAATCAGAAGCGAA
TTGAAGAATATATTCGTAATCAATTACAAGAAGACGTGATAGCAGATTAGCTCAGTCTTTTTGAGGAGTATGATCCGTTTACAGGTGAGAATAATAAAAG
AAAGTAATCTTAAAGAGACCCGCTATTCGGGTCAGCTAGCAAAGGTGGTGCTGAAGGGGAACCATTCGGTAGGCCTTTAGGCCTCGGCCGGTAGCAGAGG
CTTTCAGCCGAAGAGCAAGCCACCTGTTCTCACGGGTGGTTTTGAC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
417 bp138 aa134550+No
ORF function : Transposase
Chemistry : Y1

ORF sequence :

MRQDNNSLAHTTWNCKYHIVFAPKYRRQIIYGKYKASIGQILRLLCERKGVEIHEAEACPDHIHMLVSEPPKLSISSFMGYLKGKSSLMIFDRHANLKYK
YGNRKFWCRGFYVDTVGRNQKRIEEYIRNQLQEDVIAD

 

Blast result :
Comments
ISStrs1 is 93% aa similar to IS657.
References