ISStrs1
- Family IS200/IS605
- Group IS200
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FR873481.1 | ND | Streptococcus salivarius | Streptococcus salivarius CCHSS3 |
DNA section
IS Length : 746 bp
Ends
Left end : ATCTTACGAAAACCACTAGCTGTGCTAGTGGTTCCGAAAAGCTTTTAGCGATGTATCAAAAAAAGTCCCCCTAAAGTGTTATATTAGATAAGGTTTCCCG II struct. : Yes
Right end : GGTGCTGAAGGGGAACCATTCGGTAGGCCTTTAGGCCTCGGCCGGTAGCAGAGGCTTTCAGCCGAAGAGCAAGCCACCTGTTCTCACGGGTGGTTTTGAC II struct. : Yes
Insertion site
Left flank | LE cleavage site | Right flank | RE cleavage site |
---|---|---|---|
AGGTCTAGCTTTT | TTTT | TGTTTTTATCAGT | TGAC |
DNA sequence
ATCTTACGAAAACCACTAGCTGTGCTAGTGGTTCCGAAAAGCTTTTAGCGATGTATCAAAAAAAGTCCCCCTAAAGTGTTATATTAGATAAGGTTTCCCG
ACCACTAACTAATATACAAAAGGAGGCCCCCTGATGAGACAGGATAATAATAGTTTAGCACATACTACATGGAATTGTAAGTATCATATTGTTTTCGCCC
CAAAATATAGACGTCAGATAATCTATGGGAAATACAAAGCAAGTATTGGTCAAATCTTACGGTTATTATGTGAAAGAAAAGGCGTTGAAATTCATGAAGC
AGAAGCTTGCCCAGATCATATTCACATGTTAGTGAGTGAACCACCGAAACTAAGTATTTCTTCATTTATGGGATATTTAAAGGGTAAAAGTAGCTTAATG
ATATTCGACCGACACGCTAATTTAAAGTATAAATATGGGAATCGCAAATTTTGGTGTCGAGGCTTTTATGTTGATACGGTTGGGCGAAATCAGAAGCGAA
TTGAAGAATATATTCGTAATCAATTACAAGAAGACGTGATAGCAGATTAGCTCAGTCTTTTTGAGGAGTATGATCCGTTTACAGGTGAGAATAATAAAAG
AAAGTAATCTTAAAGAGACCCGCTATTCGGGTCAGCTAGCAAAGGTGGTGCTGAAGGGGAACCATTCGGTAGGCCTTTAGGCCTCGGCCGGTAGCAGAGG
CTTTCAGCCGAAGAGCAAGCCACCTGTTCTCACGGGTGGTTTTGAC
ACCACTAACTAATATACAAAAGGAGGCCCCCTGATGAGACAGGATAATAATAGTTTAGCACATACTACATGGAATTGTAAGTATCATATTGTTTTCGCCC
CAAAATATAGACGTCAGATAATCTATGGGAAATACAAAGCAAGTATTGGTCAAATCTTACGGTTATTATGTGAAAGAAAAGGCGTTGAAATTCATGAAGC
AGAAGCTTGCCCAGATCATATTCACATGTTAGTGAGTGAACCACCGAAACTAAGTATTTCTTCATTTATGGGATATTTAAAGGGTAAAAGTAGCTTAATG
ATATTCGACCGACACGCTAATTTAAAGTATAAATATGGGAATCGCAAATTTTGGTGTCGAGGCTTTTATGTTGATACGGTTGGGCGAAATCAGAAGCGAA
TTGAAGAATATATTCGTAATCAATTACAAGAAGACGTGATAGCAGATTAGCTCAGTCTTTTTGAGGAGTATGATCCGTTTACAGGTGAGAATAATAAAAG
AAAGTAATCTTAAAGAGACCCGCTATTCGGGTCAGCTAGCAAAGGTGGTGCTGAAGGGGAACCATTCGGTAGGCCTTTAGGCCTCGGCCGGTAGCAGAGG
CTTTCAGCCGAAGAGCAAGCCACCTGTTCTCACGGGTGGTTTTGAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
417 bp | 138 aa | 134 | 550 | + | No |
Chemistry : Y1
ORF sequence :
MRQDNNSLAHTTWNCKYHIVFAPKYRRQIIYGKYKASIGQILRLLCERKGVEIHEAEACPDHIHMLVSEPPKLSISSFMGYLKGKSSLMIFDRHANLKYK
YGNRKFWCRGFYVDTVGRNQKRIEEYIRNQLQEDVIAD
YGNRKFWCRGFYVDTVGRNQKRIEEYIRNQLQEDVIAD
Blast result :
Comments
ISStrs1 is 93% aa similar to IS657.
References