ISBli30
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP014869 | ND | Brevibacterium linens | Brevibacterium linens Brevibacterium linens BS258 Brevibacterium epidermidis BS258 |
DNA section
IS Length : 1435 bp
Ends
IR Length : 27/31
IRL : GGCTCTTCGCAATTGAGAGTGTAGATCGGTGATTCCAGGACACGGCGAGT
IRR : GGCTCATCGTAATTGAGAGTGTAGAACCGGTCTGAAGCCACCGGACTCGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ACGACCTTTCCG | AGTTTCGC | GTTGATCGAGGG | 8 |
DNA sequence
GGCTCTTCGCAATTGAGAGTGTAGATCGGTGATTCCAGGACACGGCGAGTCGCTGCGCGGATAGACGTCGAGGTCTTCCGATGATGGAAGTTCTCACACA
ATCCATCCGAAAGACCTCGACGTGGCCAAGCCTACTTTCTCGACCCCTGACCTCACGACATTCTGCCGACTCGACACCCTCGACCTCACTTGCATTGGCC
AGCACATCACCGGGCACAAGGCGATTCTGGAATGCCGGCCCAACACTGCTGATGACTGGTGCCGTCGGTGCGGTGGCCACGGGATCGTTCGCGATACCGT
CGTCCGCCGTCTGGCCCACGAACCTTTCGGCCACCGACCAACCACGCTTCATCTTCGCCTCCGCCGTTACAAATGCGTCGAGTGTGGCCGCGTCTGGCGT
CAAGACGCCACAGCCGCGGCACCACCACGAGCGAAGATCTCGCGAACCGGCCTCGACTGGGCGTTGCGTGCCCTCGTCATCGATCACGACACCGTGTCCG
TCATCGCTGCGAAACTCGCAGTGTCCTGGCACACCGCGAATTCCGCCGTCCTCGCTGAAGGTCAGCGGTTGTTGATCAACGACCCGACTCGTTTCGACGG
GGTCAGCGTCATTGGTGTCGACGAGCATGTATGGCGGCATACCCGGCGTGGTGACAAGTACGTCACCGTCATCATCGACCTCACCCCGATCAGCGAGGGA
ACAGGCTCGGCACGTCTGCTCGACATGGTGGCTGGCCGTTCGAAGCAGGTGTTCAAACAATGGTTGAAAGACCGACCGAAAAACTGGCGTGAGGGCATCG
ACGTCGTCGCGATGGACGGATTCTCCGGCTTCAAAACAGCCTCATCTGAGGAACTGCCCGACGCTGTCGAAGTCATGGACCCCTTCCACGTCGTCAAACT
CGCCGGTGATGCCCTCGACGAGGTACGTCGCCGAGTTCAGCAGGAGACAACCGGCCATCGCGGACGAGCAAAGGACCCGTTGTACCGGGCAAGAAGAACT
CTGCACACGGGCAGCAGCTTACTCACGACCAAGCAGCAGGAAAGAATCGCGAACCTCTTCGCTGATGCGAACTTCACCGAAGTCGAAGTCACTTGGGCCG
TCTACCAAGACATTGTCAGCGCCTACCGAACCGCGGACCGCAAAGAGGGCAAGAGACTCTTGCAAACGGTCATCGACGCCCTGACAACGAATCTGCCATC
CGAACTTGTCGAGCTCAAACGGTTAGGACGAACGTTGAAGCGTCGAGCTGCTGATGTGCTCGCGTTCTTCACCCGACCGGGAACGTCGAACGGTCCCACT
GAAGCGATCAACGGCAGACTCGAGCATCTACGCGGGTCCGCGCTGGGATTCCGCAACCTCACGCATTACATCGCGAGGTGTCTGCTCGAGTCCGGTGGCT
TCAGACCGGTTCTACACTCTCAATTACGATGAGCC
ATCCATCCGAAAGACCTCGACGTGGCCAAGCCTACTTTCTCGACCCCTGACCTCACGACATTCTGCCGACTCGACACCCTCGACCTCACTTGCATTGGCC
AGCACATCACCGGGCACAAGGCGATTCTGGAATGCCGGCCCAACACTGCTGATGACTGGTGCCGTCGGTGCGGTGGCCACGGGATCGTTCGCGATACCGT
CGTCCGCCGTCTGGCCCACGAACCTTTCGGCCACCGACCAACCACGCTTCATCTTCGCCTCCGCCGTTACAAATGCGTCGAGTGTGGCCGCGTCTGGCGT
CAAGACGCCACAGCCGCGGCACCACCACGAGCGAAGATCTCGCGAACCGGCCTCGACTGGGCGTTGCGTGCCCTCGTCATCGATCACGACACCGTGTCCG
TCATCGCTGCGAAACTCGCAGTGTCCTGGCACACCGCGAATTCCGCCGTCCTCGCTGAAGGTCAGCGGTTGTTGATCAACGACCCGACTCGTTTCGACGG
GGTCAGCGTCATTGGTGTCGACGAGCATGTATGGCGGCATACCCGGCGTGGTGACAAGTACGTCACCGTCATCATCGACCTCACCCCGATCAGCGAGGGA
ACAGGCTCGGCACGTCTGCTCGACATGGTGGCTGGCCGTTCGAAGCAGGTGTTCAAACAATGGTTGAAAGACCGACCGAAAAACTGGCGTGAGGGCATCG
ACGTCGTCGCGATGGACGGATTCTCCGGCTTCAAAACAGCCTCATCTGAGGAACTGCCCGACGCTGTCGAAGTCATGGACCCCTTCCACGTCGTCAAACT
CGCCGGTGATGCCCTCGACGAGGTACGTCGCCGAGTTCAGCAGGAGACAACCGGCCATCGCGGACGAGCAAAGGACCCGTTGTACCGGGCAAGAAGAACT
CTGCACACGGGCAGCAGCTTACTCACGACCAAGCAGCAGGAAAGAATCGCGAACCTCTTCGCTGATGCGAACTTCACCGAAGTCGAAGTCACTTGGGCCG
TCTACCAAGACATTGTCAGCGCCTACCGAACCGCGGACCGCAAAGAGGGCAAGAGACTCTTGCAAACGGTCATCGACGCCCTGACAACGAATCTGCCATC
CGAACTTGTCGAGCTCAAACGGTTAGGACGAACGTTGAAGCGTCGAGCTGCTGATGTGCTCGCGTTCTTCACCCGACCGGGAACGTCGAACGGTCCCACT
GAAGCGATCAACGGCAGACTCGAGCATCTACGCGGGTCCGCGCTGGGATTCCGCAACCTCACGCATTACATCGCGAGGTGTCTGCTCGAGTCCGGTGGCT
TCAGACCGGTTCTACACTCTCAATTACGATGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1311 bp | 436 aa | 122 | 1432 | + | No |
Chemistry : Unknow
ORF sequence :
MAKPTFSTPDLTTFCRLDTLDLTCIGQHITGHKAILECRPNTADDWCRRCGGHGIVRDTVVRRLAHEPFGHRPTTLHLRLRRYKCVECGRVWRQDATAAA
PPRAKISRTGLDWALRALVIDHDTVSVIAAKLAVSWHTANSAVLAEGQRLLINDPTRFDGVSVIGVDEHVWRHTRRGDKYVTVIIDLTPISEGTGSARLL
DMVAGRSKQVFKQWLKDRPKNWREGIDVVAMDGFSGFKTASSEELPDAVEVMDPFHVVKLAGDALDEVRRRVQQETTGHRGRAKDPLYRARRTLHTGSSL
LTTKQQERIANLFADANFTEVEVTWAVYQDIVSAYRTADRKEGKRLLQTVIDALTTNLPSELVELKRLGRTLKRRAADVLAFFTRPGTSNGPTEAINGRL
EHLRGSALGFRNLTHYIARCLLESGGFRPVLHSQLR
PPRAKISRTGLDWALRALVIDHDTVSVIAAKLAVSWHTANSAVLAEGQRLLINDPTRFDGVSVIGVDEHVWRHTRRGDKYVTVIIDLTPISEGTGSARLL
DMVAGRSKQVFKQWLKDRPKNWREGIDVVAMDGFSGFKTASSEELPDAVEVMDPFHVVKLAGDALDEVRRRVQQETTGHRGRAKDPLYRARRTLHTGSSL
LTTKQQERIANLFADANFTEVEVTWAVYQDIVSAYRTADRKEGKRLLQTVIDALTTNLPSELVELKRLGRTLKRRAADVLAFFTRPGTSNGPTEAINGRL
EHLRGSALGFRNLTHYIARCLLESGGFRPVLHSQLR
Blast result :
Comments
ISBli30 is 93% aa similar to ISBli1.
References
1] Sebastien Levesque (2017) Direct submission.
2] Zhu,Y. and Sun,C. (2016) Direct GenBank submission.
2] Zhu,Y. and Sun,C. (2016) Direct GenBank submission.