ISEc77
- Family IS4
- Group IS10
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Escherichia coli | Escherichia coli |
DNA section
IS Length : 1318 bp
Ends
IR Length : 1318
IRL : CTGAGGAATCCCCACAAATGGAGTAGGTAAAACAAATAGTTAGGCGAGAT
IRR : CTGACGGATCCCCATAAACGCTCTAATCATATCAATAACTTACCGATTTA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
CTGAGGAATCCCCACAAATGGAGTAGGTAAAACAAATAGTTAGGCGAGATGGGAACATTCATGGCAGTTCCTGATCTGATCGTTCGCCAAAACTAAACCG
AGGACCAAGCCATGAATGTTCAACGAATGCTCGCCGATTTTCTCTCATTTGTCACTCCCCAAAACATCCATAAAACCAGAATGGCGTCACTTTGCGCGTC
GTTGCAAAGTTTAGTCACCAACGGCAAATGTACGGTCACTGCCATCGGTCGCGGAATTCAAAGTGCCGCTACTGAAAAAAGCTGTATTAAAAGAGCCGAC
CGGCTGCTGAGTAACGAAGGTTTACAGGACGACATTCCGCTGATTTATGCGGCACTGACGAAGGCATTAGTTCAAACTAAACAACCCCTTATCCTGGTTG
ATTGGAGTAACGCCGACAATAAAAAACGTCACTTTATCTTGCGGGCCAGCCTCGCACTCGAAAGCCGCTCTTTGACCTTGCTGCAAGAAGTGAAAGCGAT
TGATGAGTACAACTGCCCACGCGTGCATCAGGCATTTTTACTGCGCCTCAAGGCAAGCCTGCCAGCAGATTGCCGACCGATTATCGTTACCGACGCCGGT
TTTAAGGTGCCGTGGCTGAAACAAATTCGTAAGTTGGGCTGGCATTATATTGCGCGGGTGCGCGGCAATCAGACGCTGCAACTGCCTGATTCTAGAACAT
TTATCAGTGTGGGCCAGCTCTACAAAAAAGCCAGAACGACGCCGCAGTGTTTGGGTAAAATTAAGCTCACTAGCAGCCAGCGTTATGTCACCACAGCAGT
GTTAGTCGGCACGCACTGGAAACTTCGAAAACGCGATAAACATAAGTCATACAAAGAGCCGTGGTTACTGGTAAGTTCATTAGCGCAAACAACCGATTAT
GCTTCAAAAATCGCTAAGTGTTACAGCGCCAGAATGCAAATTGAAGAGAGTTTCCGCGACCAGAAAAGCCAGACATATGGTCTTGGCAGCAACGCGCATC
AGACCTATAAAAAGGAACGTCTCAAAGTGCTGTTAATGCTTGCTGCGCTCGCCAACTGGCTTCATTATATGCTGGGATTGGCGGTGGAAATCAGTGGCCA
ACATCGGTCGTTGCAAGCCAACAGCATCAAACATCGACGGGTGTTGTCGTGCAACTATTTAGGAATGCGGTTATGTCGTCTGGCACGGCTGACTATCTCA
ACGCAGGATATCCAAGCTGCCATCAGGCAAATCATGACTTGGGCTGAAGAGTGGGATTGGAAAAGTATTAAATCGGTAAGTTATTGATATGATTAGAGCG
TTTATGGGGATCCGTCAG
AGGACCAAGCCATGAATGTTCAACGAATGCTCGCCGATTTTCTCTCATTTGTCACTCCCCAAAACATCCATAAAACCAGAATGGCGTCACTTTGCGCGTC
GTTGCAAAGTTTAGTCACCAACGGCAAATGTACGGTCACTGCCATCGGTCGCGGAATTCAAAGTGCCGCTACTGAAAAAAGCTGTATTAAAAGAGCCGAC
CGGCTGCTGAGTAACGAAGGTTTACAGGACGACATTCCGCTGATTTATGCGGCACTGACGAAGGCATTAGTTCAAACTAAACAACCCCTTATCCTGGTTG
ATTGGAGTAACGCCGACAATAAAAAACGTCACTTTATCTTGCGGGCCAGCCTCGCACTCGAAAGCCGCTCTTTGACCTTGCTGCAAGAAGTGAAAGCGAT
TGATGAGTACAACTGCCCACGCGTGCATCAGGCATTTTTACTGCGCCTCAAGGCAAGCCTGCCAGCAGATTGCCGACCGATTATCGTTACCGACGCCGGT
TTTAAGGTGCCGTGGCTGAAACAAATTCGTAAGTTGGGCTGGCATTATATTGCGCGGGTGCGCGGCAATCAGACGCTGCAACTGCCTGATTCTAGAACAT
TTATCAGTGTGGGCCAGCTCTACAAAAAAGCCAGAACGACGCCGCAGTGTTTGGGTAAAATTAAGCTCACTAGCAGCCAGCGTTATGTCACCACAGCAGT
GTTAGTCGGCACGCACTGGAAACTTCGAAAACGCGATAAACATAAGTCATACAAAGAGCCGTGGTTACTGGTAAGTTCATTAGCGCAAACAACCGATTAT
GCTTCAAAAATCGCTAAGTGTTACAGCGCCAGAATGCAAATTGAAGAGAGTTTCCGCGACCAGAAAAGCCAGACATATGGTCTTGGCAGCAACGCGCATC
AGACCTATAAAAAGGAACGTCTCAAAGTGCTGTTAATGCTTGCTGCGCTCGCCAACTGGCTTCATTATATGCTGGGATTGGCGGTGGAAATCAGTGGCCA
ACATCGGTCGTTGCAAGCCAACAGCATCAAACATCGACGGGTGTTGTCGTGCAACTATTTAGGAATGCGGTTATGTCGTCTGGCACGGCTGACTATCTCA
ACGCAGGATATCCAAGCTGCCATCAGGCAAATCATGACTTGGGCTGAAGAGTGGGATTGGAAAAGTATTAAATCGGTAAGTTATTGATATGATTAGAGCG
TTTATGGGGATCCGTCAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1176 bp | 391 aa | 112 | 1287 | + | No |
Chemistry : DDE
ORF sequence :
MLADFLSFVTPQNIHKTRMASLCASLQSLVTNGKCTVTAIGRGIQSAATEKSCIKRADRLLSNEGLQDDIPLIYAALTKALVQTKQPLILVDWSNADNKK
RHFILRASLALESRSLTLLQEVKAIDEYNCPRVHQAFLLRLKASLPADCRPIIVTDAGFKVPWLKQIRKLGWHYIARVRGNQTLQLPDSRTFISVGQLYK
KARTTPQCLGKIKLTSSQRYVTTAVLVGTHWKLRKRDKHKSYKEPWLLVSSLAQTTDYASKIAKCYSARMQIEESFRDQKSQTYGLGSNAHQTYKKERLK
VLLMLAALANWLHYMLGLAVEISGQHRSLQANSIKHRRVLSCNYLGMRLCRLARLTISTQDIQAAIRQIMTWAEEWDWKSIKSVSY
RHFILRASLALESRSLTLLQEVKAIDEYNCPRVHQAFLLRLKASLPADCRPIIVTDAGFKVPWLKQIRKLGWHYIARVRGNQTLQLPDSRTFISVGQLYK
KARTTPQCLGKIKLTSSQRYVTTAVLVGTHWKLRKRDKHKSYKEPWLLVSSLAQTTDYASKIAKCYSARMQIEESFRDQKSQTYGLGSNAHQTYKKERLK
VLLMLAALANWLHYMLGLAVEISGQHRSLQANSIKHRRVLSCNYLGMRLCRLARLTISTQDIQAAIRQIMTWAEEWDWKSIKSVSY
Blast result :
Comments
ISEc77 is 76% aa similar to ISEc29.
References
1] Papagiannitsis Costas (2017) Direct submission to ISfinder