ISEc77

  • Family IS4
  • Group IS10
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Escherichia coli
Escherichia coli
DNA section
IS Length : 1318 bp

Ends


IR Length : 1318

IRL : CTGAGGAATCCCCACAAATGGAGTAGGTAAAACAAATAGTTAGGCGAGAT
IRR : CTGACGGATCCCCATAAACGCTCTAATCATATCAATAACTTACCGATTTA

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

CTGAGGAATCCCCACAAATGGAGTAGGTAAAACAAATAGTTAGGCGAGATGGGAACATTCATGGCAGTTCCTGATCTGATCGTTCGCCAAAACTAAACCG
AGGACCAAGCCATGAATGTTCAACGAATGCTCGCCGATTTTCTCTCATTTGTCACTCCCCAAAACATCCATAAAACCAGAATGGCGTCACTTTGCGCGTC
GTTGCAAAGTTTAGTCACCAACGGCAAATGTACGGTCACTGCCATCGGTCGCGGAATTCAAAGTGCCGCTACTGAAAAAAGCTGTATTAAAAGAGCCGAC
CGGCTGCTGAGTAACGAAGGTTTACAGGACGACATTCCGCTGATTTATGCGGCACTGACGAAGGCATTAGTTCAAACTAAACAACCCCTTATCCTGGTTG
ATTGGAGTAACGCCGACAATAAAAAACGTCACTTTATCTTGCGGGCCAGCCTCGCACTCGAAAGCCGCTCTTTGACCTTGCTGCAAGAAGTGAAAGCGAT
TGATGAGTACAACTGCCCACGCGTGCATCAGGCATTTTTACTGCGCCTCAAGGCAAGCCTGCCAGCAGATTGCCGACCGATTATCGTTACCGACGCCGGT
TTTAAGGTGCCGTGGCTGAAACAAATTCGTAAGTTGGGCTGGCATTATATTGCGCGGGTGCGCGGCAATCAGACGCTGCAACTGCCTGATTCTAGAACAT
TTATCAGTGTGGGCCAGCTCTACAAAAAAGCCAGAACGACGCCGCAGTGTTTGGGTAAAATTAAGCTCACTAGCAGCCAGCGTTATGTCACCACAGCAGT
GTTAGTCGGCACGCACTGGAAACTTCGAAAACGCGATAAACATAAGTCATACAAAGAGCCGTGGTTACTGGTAAGTTCATTAGCGCAAACAACCGATTAT
GCTTCAAAAATCGCTAAGTGTTACAGCGCCAGAATGCAAATTGAAGAGAGTTTCCGCGACCAGAAAAGCCAGACATATGGTCTTGGCAGCAACGCGCATC
AGACCTATAAAAAGGAACGTCTCAAAGTGCTGTTAATGCTTGCTGCGCTCGCCAACTGGCTTCATTATATGCTGGGATTGGCGGTGGAAATCAGTGGCCA
ACATCGGTCGTTGCAAGCCAACAGCATCAAACATCGACGGGTGTTGTCGTGCAACTATTTAGGAATGCGGTTATGTCGTCTGGCACGGCTGACTATCTCA
ACGCAGGATATCCAAGCTGCCATCAGGCAAATCATGACTTGGGCTGAAGAGTGGGATTGGAAAAGTATTAAATCGGTAAGTTATTGATATGATTAGAGCG
TTTATGGGGATCCGTCAG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1176 bp391 aa1121287+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MLADFLSFVTPQNIHKTRMASLCASLQSLVTNGKCTVTAIGRGIQSAATEKSCIKRADRLLSNEGLQDDIPLIYAALTKALVQTKQPLILVDWSNADNKK
RHFILRASLALESRSLTLLQEVKAIDEYNCPRVHQAFLLRLKASLPADCRPIIVTDAGFKVPWLKQIRKLGWHYIARVRGNQTLQLPDSRTFISVGQLYK
KARTTPQCLGKIKLTSSQRYVTTAVLVGTHWKLRKRDKHKSYKEPWLLVSSLAQTTDYASKIAKCYSARMQIEESFRDQKSQTYGLGSNAHQTYKKERLK
VLLMLAALANWLHYMLGLAVEISGQHRSLQANSIKHRRVLSCNYLGMRLCRLARLTISTQDIQAAIRQIMTWAEEWDWKSIKSVSY

 

Blast result :
Comments
ISEc77 is 76% aa similar to ISEc29.
References
1] Papagiannitsis Costas (2017) Direct submission to ISfinder