ISBli15

  • Family ISNCY
  • Group ISLbi1
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP017150 ND Brevibacterium linens
Brevibacterium linens SMQ-1335
Brevibacterium linens
Brevibacterium aurantiacum
DNA section
IS Length : 1470 bp

Ends


IR Length : 14/24

IRL : CGACGAGACTCATAGATAGTCCCCGCGTAGCCAAGGGTCGTGCCTCACAT
IRR : CGGAGTGCCTCATGTCAATACCCCCGGCTAATGAGGGTCGTGCCTCACAC

Insertion site


Left flankDirect repeatRight flankDR Length
CCGCAGGCCAATCATTGCTGCGGCTCTTCTTGTTG5

DNA sequence

CGACGAGACTCATAGATAGTCCCCGCGTAGCCAAGGGTCGTGCCTCACATAAATTTCCCCGCCAGACTCTTCACCCGGGGACATAGACACGACGACGATG
GGGTCATGGTCGACAAGGACGTTTCCATGAACACCAGAATCGAGATCACGAAGAAATACGCCACCGCGTATGCCAAGGCCGGCAGGCAACAAAAGTCGGC
CATCCTCGATGCCGTCACCGACATCACTGGCTGGAACCGCGACCACGCTCGCCAACAGCTCATGCGTCGGACTCGCCAGCCCAAGGGCAGAGCCAACGCC
ACCGTGGCCGTGATCGATCGACGCAAGACTAAGGCCCGTAAGTACTCCTACGACGCGATCAAGATCCTGCAGTATGTGTGGTCAGTTGCCGGTGGAATCT
GCGGCAAATACCTCGCCCAAGCTATGGTCGATCTCCTCAACTCCCTCGAAGCCCACAACCACCTCGTGCCTGGCCAGGGCCGCTACAGCACGAACGTACG
CGACGAGCTGGTGTCGATGAGTCCAGCCACGATCGACCGATACCTGGCACCAGCCCGGGCTAGAGACACCCTGCGTGGGAAGTCGGCAACGAAGCCTGGC
ACACTGTTGCGCAACTCGATCCAGGTTCGTAAGGCCGGTGATGAAGTCGAAGCCGAACCCGGATTCTTCGAAGTCGATACCGTTGCCCACTGCGGACCGA
CGTTGAAGGGCGAGTTCATCCGCTCGGTCAATTACACCGATATGCACACCGGGTGGGTCTACACCCGAGCAGTCAAGAACAATGCTGCCGTACACATTGT
TGCCGCGTGCACTCATTTCGTTGAAGCGGTGCCCTATCTCGTGACCGGGCTCGACTTCGACAACGGTTCAGAGTTCATCAATCACGACCTCATCGACTGG
GCGGCCCAGCGGAAGATCTTCTTCACTCGCGGCAGGCCTTATACGAAGAATGACCAGGCCACGATCGAGTCAAAGAACAACCATCTCGTGCGTCGGTACG
GGTTCTACTACCGCTACGACACGACAACCGAACTCGGACTCATGACGACGCTCTGGGCACTGGTCAATGACCGGTTGAACTACTTCACTCCGACGAAGAA
ACCCACCGGGTATTCCACTGATTCGGTGGGTCGTCGCAAACGTGTTTATGACACCCCGCGGACCCCGTTCGTGCGTCTGCTGGATTCCGGGATCCTCAAC
AGAAAGCAAGTCGCTGAGCTCAGGGCTTACAAGGCTGGTCTTGACCCGGTCCATATCGCGGCCGAGATCGATCGGATCCAGCAGAGGCTGATCAAGCTCG
CTGCCGGGAAGACCGCGCGTATGGAACGTGAGATCGAGGCCAAGCAGGCATTGCCCGATTCCTCGGGTATTCGGGTCAGGCCGAGTCGGGTGGGGTGAGA
GTTGTTCCCGGGGATAATTTGTGTGAGGCACGACCCTCATTAGCCGGGGGTATTGACATGAGGCACTCCG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1293 bp430 aa1061398+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MVDKDVSMNTRIEITKKYATAYAKAGRQQKSAILDAVTDITGWNRDHARQQLMRRTRQPKGRANATVAVIDRRKTKARKYSYDAIKILQYVWSVAGGICG
KYLAQAMVDLLNSLEAHNHLVPGQGRYSTNVRDELVSMSPATIDRYLAPARARDTLRGKSATKPGTLLRNSIQVRKAGDEVEAEPGFFEVDTVAHCGPTL
KGEFIRSVNYTDMHTGWVYTRAVKNNAAVHIVAACTHFVEAVPYLVTGLDFDNGSEFINHDLIDWAAQRKIFFTRGRPYTKNDQATIESKNNHLVRRYGF
YYRYDTTTELGLMTTLWALVNDRLNYFTPTKKPTGYSTDSVGRRKRVYDTPRTPFVRLLDSGILNRKQVAELRAYKAGLDPVHIAAEIDRIQQRLIKLAA
GKTARMEREIEAKQALPDSSGIRVRPSRVG

 

Blast result :
Comments
ISBli15 is 53% aa similar to ISKol11.
References
1] Sebastien Levesque (2017) Direct submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.