ISBli15
- Family ISNCY
- Group ISLbi1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP017150 | ND | Brevibacterium linens | Brevibacterium linens SMQ-1335 Brevibacterium linens Brevibacterium aurantiacum |
DNA section
IS Length : 1470 bp
Ends
IR Length : 14/24
IRL : CGACGAGACTCATAGATAGTCCCCGCGTAGCCAAGGGTCGTGCCTCACAT
IRR : CGGAGTGCCTCATGTCAATACCCCCGGCTAATGAGGGTCGTGCCTCACAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCGCAGGCCAATCAT | TGCTG | CGGCTCTTCTTGTTG | 5 |
DNA sequence
CGACGAGACTCATAGATAGTCCCCGCGTAGCCAAGGGTCGTGCCTCACATAAATTTCCCCGCCAGACTCTTCACCCGGGGACATAGACACGACGACGATG
GGGTCATGGTCGACAAGGACGTTTCCATGAACACCAGAATCGAGATCACGAAGAAATACGCCACCGCGTATGCCAAGGCCGGCAGGCAACAAAAGTCGGC
CATCCTCGATGCCGTCACCGACATCACTGGCTGGAACCGCGACCACGCTCGCCAACAGCTCATGCGTCGGACTCGCCAGCCCAAGGGCAGAGCCAACGCC
ACCGTGGCCGTGATCGATCGACGCAAGACTAAGGCCCGTAAGTACTCCTACGACGCGATCAAGATCCTGCAGTATGTGTGGTCAGTTGCCGGTGGAATCT
GCGGCAAATACCTCGCCCAAGCTATGGTCGATCTCCTCAACTCCCTCGAAGCCCACAACCACCTCGTGCCTGGCCAGGGCCGCTACAGCACGAACGTACG
CGACGAGCTGGTGTCGATGAGTCCAGCCACGATCGACCGATACCTGGCACCAGCCCGGGCTAGAGACACCCTGCGTGGGAAGTCGGCAACGAAGCCTGGC
ACACTGTTGCGCAACTCGATCCAGGTTCGTAAGGCCGGTGATGAAGTCGAAGCCGAACCCGGATTCTTCGAAGTCGATACCGTTGCCCACTGCGGACCGA
CGTTGAAGGGCGAGTTCATCCGCTCGGTCAATTACACCGATATGCACACCGGGTGGGTCTACACCCGAGCAGTCAAGAACAATGCTGCCGTACACATTGT
TGCCGCGTGCACTCATTTCGTTGAAGCGGTGCCCTATCTCGTGACCGGGCTCGACTTCGACAACGGTTCAGAGTTCATCAATCACGACCTCATCGACTGG
GCGGCCCAGCGGAAGATCTTCTTCACTCGCGGCAGGCCTTATACGAAGAATGACCAGGCCACGATCGAGTCAAAGAACAACCATCTCGTGCGTCGGTACG
GGTTCTACTACCGCTACGACACGACAACCGAACTCGGACTCATGACGACGCTCTGGGCACTGGTCAATGACCGGTTGAACTACTTCACTCCGACGAAGAA
ACCCACCGGGTATTCCACTGATTCGGTGGGTCGTCGCAAACGTGTTTATGACACCCCGCGGACCCCGTTCGTGCGTCTGCTGGATTCCGGGATCCTCAAC
AGAAAGCAAGTCGCTGAGCTCAGGGCTTACAAGGCTGGTCTTGACCCGGTCCATATCGCGGCCGAGATCGATCGGATCCAGCAGAGGCTGATCAAGCTCG
CTGCCGGGAAGACCGCGCGTATGGAACGTGAGATCGAGGCCAAGCAGGCATTGCCCGATTCCTCGGGTATTCGGGTCAGGCCGAGTCGGGTGGGGTGAGA
GTTGTTCCCGGGGATAATTTGTGTGAGGCACGACCCTCATTAGCCGGGGGTATTGACATGAGGCACTCCG
GGGTCATGGTCGACAAGGACGTTTCCATGAACACCAGAATCGAGATCACGAAGAAATACGCCACCGCGTATGCCAAGGCCGGCAGGCAACAAAAGTCGGC
CATCCTCGATGCCGTCACCGACATCACTGGCTGGAACCGCGACCACGCTCGCCAACAGCTCATGCGTCGGACTCGCCAGCCCAAGGGCAGAGCCAACGCC
ACCGTGGCCGTGATCGATCGACGCAAGACTAAGGCCCGTAAGTACTCCTACGACGCGATCAAGATCCTGCAGTATGTGTGGTCAGTTGCCGGTGGAATCT
GCGGCAAATACCTCGCCCAAGCTATGGTCGATCTCCTCAACTCCCTCGAAGCCCACAACCACCTCGTGCCTGGCCAGGGCCGCTACAGCACGAACGTACG
CGACGAGCTGGTGTCGATGAGTCCAGCCACGATCGACCGATACCTGGCACCAGCCCGGGCTAGAGACACCCTGCGTGGGAAGTCGGCAACGAAGCCTGGC
ACACTGTTGCGCAACTCGATCCAGGTTCGTAAGGCCGGTGATGAAGTCGAAGCCGAACCCGGATTCTTCGAAGTCGATACCGTTGCCCACTGCGGACCGA
CGTTGAAGGGCGAGTTCATCCGCTCGGTCAATTACACCGATATGCACACCGGGTGGGTCTACACCCGAGCAGTCAAGAACAATGCTGCCGTACACATTGT
TGCCGCGTGCACTCATTTCGTTGAAGCGGTGCCCTATCTCGTGACCGGGCTCGACTTCGACAACGGTTCAGAGTTCATCAATCACGACCTCATCGACTGG
GCGGCCCAGCGGAAGATCTTCTTCACTCGCGGCAGGCCTTATACGAAGAATGACCAGGCCACGATCGAGTCAAAGAACAACCATCTCGTGCGTCGGTACG
GGTTCTACTACCGCTACGACACGACAACCGAACTCGGACTCATGACGACGCTCTGGGCACTGGTCAATGACCGGTTGAACTACTTCACTCCGACGAAGAA
ACCCACCGGGTATTCCACTGATTCGGTGGGTCGTCGCAAACGTGTTTATGACACCCCGCGGACCCCGTTCGTGCGTCTGCTGGATTCCGGGATCCTCAAC
AGAAAGCAAGTCGCTGAGCTCAGGGCTTACAAGGCTGGTCTTGACCCGGTCCATATCGCGGCCGAGATCGATCGGATCCAGCAGAGGCTGATCAAGCTCG
CTGCCGGGAAGACCGCGCGTATGGAACGTGAGATCGAGGCCAAGCAGGCATTGCCCGATTCCTCGGGTATTCGGGTCAGGCCGAGTCGGGTGGGGTGAGA
GTTGTTCCCGGGGATAATTTGTGTGAGGCACGACCCTCATTAGCCGGGGGTATTGACATGAGGCACTCCG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1293 bp | 430 aa | 106 | 1398 | + | No |
Chemistry : Unknow
ORF sequence :
MVDKDVSMNTRIEITKKYATAYAKAGRQQKSAILDAVTDITGWNRDHARQQLMRRTRQPKGRANATVAVIDRRKTKARKYSYDAIKILQYVWSVAGGICG
KYLAQAMVDLLNSLEAHNHLVPGQGRYSTNVRDELVSMSPATIDRYLAPARARDTLRGKSATKPGTLLRNSIQVRKAGDEVEAEPGFFEVDTVAHCGPTL
KGEFIRSVNYTDMHTGWVYTRAVKNNAAVHIVAACTHFVEAVPYLVTGLDFDNGSEFINHDLIDWAAQRKIFFTRGRPYTKNDQATIESKNNHLVRRYGF
YYRYDTTTELGLMTTLWALVNDRLNYFTPTKKPTGYSTDSVGRRKRVYDTPRTPFVRLLDSGILNRKQVAELRAYKAGLDPVHIAAEIDRIQQRLIKLAA
GKTARMEREIEAKQALPDSSGIRVRPSRVG
KYLAQAMVDLLNSLEAHNHLVPGQGRYSTNVRDELVSMSPATIDRYLAPARARDTLRGKSATKPGTLLRNSIQVRKAGDEVEAEPGFFEVDTVAHCGPTL
KGEFIRSVNYTDMHTGWVYTRAVKNNAAVHIVAACTHFVEAVPYLVTGLDFDNGSEFINHDLIDWAAQRKIFFTRGRPYTKNDQATIESKNNHLVRRYGF
YYRYDTTTELGLMTTLWALVNDRLNYFTPTKKPTGYSTDSVGRRKRVYDTPRTPFVRLLDSGILNRKQVAELRAYKAGLDPVHIAAEIDRIQQRLIKLAA
GKTARMEREIEAKQALPDSSGIRVRPSRVG
Blast result :
Comments
ISBli15 is 53% aa similar to ISKol11.
References
1] Sebastien Levesque (2017) Direct submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.