ISPa73

  • Family IS256
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KC543497 ND Pseudomonas aeruginosa
Pseudomonas resinovorans plasmid pCAR1
Pseudomonas stutzeri 273
Pseudomonas aeruginosa PA96 plasmid pOZ176
Pseudomonas putida B6-2
Pseudomonas putida S12 plasmid pTTS12
Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3
Pseudomonas stutzeri CCUG 29243
Pseudomonas putida DOT-T1E plasmid pGRT1
Pseudomonas putida plasmid pCAR1.2
DNA section
IS Length : 1352 bp

Ends


IR Length : 27

IRL : GAGGGTGTTTTTAACTTTGTGTAAACGGTCATTTGGCAGGAGACTGCCAG
IRR : GAGGGTGTCCCGGATTATGTGTAAACGGGATTTCTATTAATCCTGCATCA

Insertion site


Left flankDirect repeatRight flankDR Length
CTTCCTCAGGCC ATCCTGAGATCCTTAG CGTACGTTAT0

DNA sequence

GAGGGTGTTTTTAACTTTGTGTAAACGGTCATTTGGCAGGAGACTGCCAGCCTCAAGGAGTACCCATGACCGTAGTAAAACGCACCAAGCGAGCGAAGCC
CGACCCTGAACTCGTTAAGCTCGCCGACAGCCTGCTGGTCAATTACAAGAAACCGGAAGATTTGATTGGCGAAAACGGCCTGCTCAAGCCAGCTCACCAA
GATGCTGGTCGAGCGTGCGCTGGAAGCCGAGATGACCGAGCACCTGGGCATGGCAAGAGTGGATCGATCTTCAACGCCGGCGGTAATGCCCGTAACGGTC
ACAGCGACAAAACCCTCAAGGGCGATTTCGGCGAACTGCCGCTGGCCATCCCTCGTGACCGCCAGGCGCTGTTCGAGCCGCAGCTGGTGGCCAAGCAGCA
AACCCGCTGGACGGGCTTCGACGACAAGATCATCTCGCTGTACGCCCGCGGCCTGAGCGTACGAGAGATCCAGGGGCACCTGGAGGAGATGTACGGCACC
GAGGTCTCCCCAACCCTCATCTCGACCGTCACGGACGCGGTAAGCGACGAGGTGAAGCTCTGGCAGGGCCGTCCACTCGATCCGCTGTACCCGATCCTTT
ATCTGGACTGCATCCACGTCAAAGTGCGCGATGCCGGCGCGGTGCGGACCAAGGCGGTGTACCTGGCTATCGGGGTCAATATGGACGGGCACAAGGAAGT
GCTGGGGCTGTGGATCGCCCAAACCGAGGGTGCCAAGTTCTGGTTGCAGGTAGTCACCGAGCTGAAGAACCGTGGCGTGCAGGACATTTTTATCGCCTGC
GTGGACGGCCTCAAGGGCTTCCCCGAGGCGATCGAAACGGTCTATCCGAAAGCCTGCGTGCAGTTGTGTATCGTGCACATGGTGCGCAACAGCCTGAACT
TCGTGTCCTGGAAAGCGCGCAAGGAAGTGGCCGCCGATCTGAAGCTGGTCTACACCTCGGCGACGGTCGAACTGGCCGAGCAACGGCTGACGGAGTTTGA
AGAAAAGTGGGGTGGTCAGTACCAGTCAATCGGCCTGTCCTGGCGGCGTAACTGGGCACGGGTTATCCCGTTCTTCGACCATCCGGCCGAGATCCGCAAG
GTGATCTACACCACCAACGCCATCGAATCGATCAACATGAGTTTGCGCAAGGTGATCAAGACCCGGGCCTCGTTCCCAACTGACGAGGCCGTGAGCAAGC
TGTTTTATCTGGCGCTGAACAACATCAGCAAGAAGTGGACGATGCCGATACGGGACTGGAAAGCGGCTCTGAATCGCTTCAGTATCCAGTTCGAAGATCG
ATTGATGCAGGATTAATAGAAATCCCGTTTACACATAATCCGGGACACCCTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1251 bp416 aa661316+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MTVVKRTKRAKPDPELVKLADSLLVNYKKPEDLIGENGLLKPAHQDAGRACAGSRDDRAPGHGKSGSIFNAGGNARNGHSDKTLKGDFGELPLAIPRDRQ
ALFEPQLVAKQQTRWTGFDDKIISLYARGLSVREIQGHLEEMYGTEVSPTLISTVTDAVSDEVKLWQGRPLDPLYPILYLDCIHVKVRDAGAVRTKAVYL
AIGVNMDGHKEVLGLWIAQTEGAKFWLQVVTELKNRGVQDIFIACVDGLKGFPEAIETVYPKACVQLCIVHMVRNSLNFVSWKARKEVAADLKLVYTSAT
VELAEQRLTEFEEKWGGQYQSIGLSWRRNWARVIPFFDHPAEIRKVIYTTNAIESINMSLRKVIKTRASFPTDEAVSKLFYLALNNISKKWTMPIRDWKA
ALNRFSIQFEDRLMQD

 

Blast result :
Comments
ISPa73 is 82% aa similar to ISXax1.
References
1] Dongsheng Zhou (2017) Direct submission.
2] Xiong,J., Alexander,D.C., Ma,J.H., Deraspe,M., Low,D.E., Jamieson,F.B. and Roy,P.H. (2013) Antimicrob. Agents Chemother. 57 (8), 3775-3782.