ISIsa1
- Family IS1595
- Group IS1595
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
BBYR01000017 | ND | Ideonella sakaiensis | Ideonella sakaiensis 201-F6 |
DNA section
IS Length : 1032 bp
Ends
IR Length : 19/23
IRL : CCTGATTCGTCACCAAGCTCAGCAGGATCACCCCATGAGCTATCCGGTGG
IRR : CCTGATTAGTCATGAACCTCAGCCGCCCCTCGAATCTGCCTCTCGCGCGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AACGGCCCCA | TCCCGGGG | AGCCGGGTGG | 8 |
DNA sequence
CCTGATTCGTCACCAAGCTCAGCAGGATCACCCCATGAGCTATCCGGTGGCTACGCTGGCAGCAGCAGAGCCGACGGAGCCCAGCATGTCGATGAACCGA
GTTCAGTTCCAGCGCGGGTTGCCGCTGAGCGAGTTCTTCGCCCGCTATTGCAGCGAGGCGCAGTGCGAAGCGGCGCTGAAGGCGCTTCGATGGCCCGACG
GCTTCCGCTGTCCGCGCTGTGCAGGGGTGGCCTGCTACGCGGTCGGTCGCCTGTTCCAGTGTTGTGCCTGCCGTCACCAGACCTCGCTGACGGCCGGTAC
GGTGATGGACAGCACCAAACTGCCGCTGCGGACCTGGTTCCTGGCCATCTACCTGATCAGCCAGGACAAGACCGGGCTGTCGTCCCTGGCCCTCATGCGG
CAGTTGGGCACCAGCTATCGCACCGCCTGGCTCGTTCACCACAAGCTGATGGCGGCCATGGCCGCGCACGACGCCACTCAGCCGCTGTCGGGCAATGTGC
AGATCGACGATGCCTACCTCGGAGGCGAGCACCCCGGCACGGTGGGCCGAGCCGATCCGGCGAAGGTTCCGATCATCGCCGCGGTCTCCACCAACGACCG
CGGTAACCCGATGCGCGTCAAGCTCGCGGCATTGACGGGCTTCACCCGCGAGGCCATCGCCAACTGGGCCCGCGTCAATCTGAAGCCGGGTTGCGACGTC
CGCAGCGACGGCCTGAGCTGCTTTGCAGGTGTCATCGACGCGGGCTGTGCACATTCGTACATCGTCGTCGGCGACCGCAAGCCCCGGGATCTGCCGCAGT
TCACCTGGGTCAACACCATCCTTGGCAACCTGAAGACCGCCATCAGCGGCGGCCTCAAGGCGTTCAAGTACGCCAAGTACGCCGGCAGCTACCTCGGCGC
CTTCGCGTTCCGCTTCAACGGCAGGTTCAATCTGCCCGCCTTGCTTCGCGACCTCATCTCCAACGCCGCCACCTCGCAACCTACGCGCGAGAGGCAGATT
CGAGGGGCGGCTGAGGTTCATGACTAATCAGG
GTTCAGTTCCAGCGCGGGTTGCCGCTGAGCGAGTTCTTCGCCCGCTATTGCAGCGAGGCGCAGTGCGAAGCGGCGCTGAAGGCGCTTCGATGGCCCGACG
GCTTCCGCTGTCCGCGCTGTGCAGGGGTGGCCTGCTACGCGGTCGGTCGCCTGTTCCAGTGTTGTGCCTGCCGTCACCAGACCTCGCTGACGGCCGGTAC
GGTGATGGACAGCACCAAACTGCCGCTGCGGACCTGGTTCCTGGCCATCTACCTGATCAGCCAGGACAAGACCGGGCTGTCGTCCCTGGCCCTCATGCGG
CAGTTGGGCACCAGCTATCGCACCGCCTGGCTCGTTCACCACAAGCTGATGGCGGCCATGGCCGCGCACGACGCCACTCAGCCGCTGTCGGGCAATGTGC
AGATCGACGATGCCTACCTCGGAGGCGAGCACCCCGGCACGGTGGGCCGAGCCGATCCGGCGAAGGTTCCGATCATCGCCGCGGTCTCCACCAACGACCG
CGGTAACCCGATGCGCGTCAAGCTCGCGGCATTGACGGGCTTCACCCGCGAGGCCATCGCCAACTGGGCCCGCGTCAATCTGAAGCCGGGTTGCGACGTC
CGCAGCGACGGCCTGAGCTGCTTTGCAGGTGTCATCGACGCGGGCTGTGCACATTCGTACATCGTCGTCGGCGACCGCAAGCCCCGGGATCTGCCGCAGT
TCACCTGGGTCAACACCATCCTTGGCAACCTGAAGACCGCCATCAGCGGCGGCCTCAAGGCGTTCAAGTACGCCAAGTACGCCGGCAGCTACCTCGGCGC
CTTCGCGTTCCGCTTCAACGGCAGGTTCAATCTGCCCGCCTTGCTTCGCGACCTCATCTCCAACGCCGCCACCTCGCAACCTACGCGCGAGAGGCAGATT
CGAGGGGCGGCTGAGGTTCATGACTAATCAGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
942 bp | 313 aa | 86 | 1027 | + | No |
Chemistry : DDE
ORF sequence :
MSMNRVQFQRGLPLSEFFARYCSEAQCEAALKALRWPDGFRCPRCAGVACYAVGRLFQCCACRHQTSLTAGTVMDSTKLPLRTWFLAIYLISQDKTGLSS
LALMRQLGTSYRTAWLVHHKLMAAMAAHDATQPLSGNVQIDDAYLGGEHPGTVGRADPAKVPIIAAVSTNDRGNPMRVKLAALTGFTREAIANWARVNLK
PGCDVRSDGLSCFAGVIDAGCAHSYIVVGDRKPRDLPQFTWVNTILGNLKTAISGGLKAFKYAKYAGSYLGAFAFRFNGRFNLPALLRDLISNAATSQPT
RERQIRGAAEVHD
LALMRQLGTSYRTAWLVHHKLMAAMAAHDATQPLSGNVQIDDAYLGGEHPGTVGRADPAKVPIIAAVSTNDRGNPMRVKLAALTGFTREAIANWARVNLK
PGCDVRSDGLSCFAGVIDAGCAHSYIVVGDRKPRDLPQFTWVNTILGNLKTAISGGLKAFKYAKYAGSYLGAFAFRFNGRFNLPALLRDLISNAATSQPT
RERQIRGAAEVHD
Blast result :
Comments
ISIsa1 is 71% aa similar to ISPa72.
References
1] ISfinder annotation (2017)
2] Yoshida,S., Hiraga,K., Takehana,T., Taniguchi,I., Yamaji,H., Maeda,Y., Toyohara,K., Miyamoto,K., Kimura,Y. and Oda,K. (2016) Science 351 (6278), 1196-1199.
2] Yoshida,S., Hiraga,K., Takehana,T., Taniguchi,I., Yamaji,H., Maeda,Y., Toyohara,K., Miyamoto,K., Kimura,Y. and Oda,K. (2016) Science 351 (6278), 1196-1199.