ISAcpr2

  • Family IS1595
  • Group IS1595
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP017448 ND Acidihalobacter prosperus
Acidihalobacter prosperus V6
DNA section
IS Length : 1046 bp

Ends


IR Length : 23

IRL : CCTGATTAGCACGATTCTTCCGCCATTGCATTCGACGATTTTGCCATCAT
IRR : CCTGATTAGCACGATTCTTCCGCTGCTCTGAGCCACTGCTCAGGTCTGGG

Insertion site


Left flankDirect repeatRight flankDR Length
AAAGCGCCAGCTTCTTTGGATAAAACAAAAAGCCCGCAGA0

DNA sequence

CCTGATTAGCACGATTCTTCCGCCATTGCATTCGACGATTTTGCCATCATGTTGTAACTCACTGAGTTGAAGTGACAAATTAGGTGACTTATGCCGATGA
ACCGTATTCAGTTTCAGGCGGAGCTGTCCTTGCCGGAATTCCTTGATCGCTACGGCACCGATGAGGACTGTGACGCGGCGGTCGAGGCAGCGCGCTGGCC
TGATGGATTTCGATGTCCAAAATGTGGTTCACATCCACACAGCGTGTTTCGCAAAGGCGCACGCAAAATCTTCCAGTGCAGTGCATGCCGATATCAGTGT
TCCTTGACGGCCGGCACGCTCTTTCAGAACAGCCCTGTGCCGTTGCGCTTGTGGTTTCTGGCCATGTATCTGCTTAGCCAAACCAAAACCGGTCTCTCCA
CGCTTGAACTGACGCGGCATCTGGGCATCAGCTATCCGGCCGCCTGGCGCCTGCACCACAAGCTGATGCAAGCGATGTGTGAACGAGAGGCGCGCTATCG
CCTGGACAGGGCCGTGCAGATCGACGACGCCTATCTGGGCGGCGAACATCCGGGGGGCAAAGCGGGGCGCGGTTCACCCAACAAGGTACCGTTCGTGGCG
GCGGTCAGCCGGGATGAACGCCAGCACCCACGTCATGCCCGTTTCAGCGTCGTGCCGGGTTTTACTCACCAGGCGATCCGCGCCTGGGCTGACAAAACCC
GGGGGCCGGGATGCCCGGTGTTGAGCGATGGCCTGCCCGCCTTCGGGGCACTCGCGGACACGCACCCGCACCAGGTCGTGGTCGCCGCCTGGCGCAAACC
ACGCGATCCGCCCGCCTTCGCCTGGGTCAACACGGTGCTGGGCAATCTCAAGACCCAGCTGTCGGGCACTTACCATGCGTTCAAGTTCCGCAAATACGCC
CAGCGCTACCTGAGTGCCGTCGCCTGGCGGTTCAACCGTCGATTTGATCTCAAAACAGTGTCGCAGCGCTTGCTGATCGCTGCGGTCAGTACCGGACCCA
GACCTGAGCAGTGGCTCAGAGCAGCGGAAGAATCGTGCTAATCAGG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
951 bp316 aa911041+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MPMNRIQFQAELSLPEFLDRYGTDEDCDAAVEAARWPDGFRCPKCGSHPHSVFRKGARKIFQCSACRYQCSLTAGTLFQNSPVPLRLWFLAMYLLSQTKT
GLSTLELTRHLGISYPAAWRLHHKLMQAMCEREARYRLDRAVQIDDAYLGGEHPGGKAGRGSPNKVPFVAAVSRDERQHPRHARFSVVPGFTHQAIRAWA
DKTRGPGCPVLSDGLPAFGALADTHPHQVVVAAWRKPRDPPAFAWVNTVLGNLKTQLSGTYHAFKFRKYAQRYLSAVAWRFNRRFDLKTVSQRLLIAAVS
TGPRPEQWLRAAEESC

 

Blast result :
Comments
ISAcpr2 is 75% aa similar to ISCap3.
References
1] ISfinder annotation (2017)
2] Khaleque,H.N., Ramsay,J.P., Murphy,R.J.T., Kaksonen,A.H., Boxall,N.J. and Watkin,E.L.J. (2016) Direct GenBank submission.