ISAzbe1

  • Family IS1595
  • Group IS1595
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
FOKJ01000238 ND Azotobacter beijerinckii
Azotobacter beijerinckii DSM 282
DNA section
IS Length : 1052 bp

Ends


IR Length : 24

IRL : CCTGATTAGCAATGATGCTCAGCCCGGCGTCCTACGGGTACTCGGCAACG
IRR : CCTGATTAGCAATGATGCTCAGCCATCCCGAATCACCCGCAGGGGGTGTG

Insertion site


Left flankDirect repeatRight flankDR Length
AAAGACCTNNNN0

DNA sequence

CCTGATTAGCAATGATGCTCAGCCCGGCGTCCTACGGGTACTCGGCAACGCCTACACTGGATATACGAACAGACTTCATGGAGGATCAATCCATGTCCAT
GAACCGAATCCAGTTCCAACCCGGCCTGTCGATGCCCGAATTTCTCAAGTATTACGGTACTCAAGCGCAGTGCGCGGCTGCATTGGAGCAGGCTCGCTGG
CCGGCAGGGTTTCGCTGCCCACGCTGTGATGGGGCCGCCTACAGCCGGGTGCACGGACGACCCCATGCGTTGTTCCAGTGCCAGGCCTGCCGGCATCAGA
CCTCGCTGATCGCCGGCACGGTAATGCAGGGCACCAAGTTGCCGCTGAACCTGTGGTTCCTGGCGATCTACCTCCTCAGCCAGGCCAAGACCGGGTTGTC
CGCTCTCGCACTCAAACGTCACCTGGGGGTCAGCTACCCGACGGCATGGCTTATCCAGCACAAGTTGATGCAGGCGATGACCCTGCGTGAGGCGTGCTAT
GTCCTCGAAGGCCGGGTCCAGGTCGACGATGCCTATCTCGGTGGCGAACTCAGCGGGGGCACGGCCGGTCGGGGGTCGGAGAACAAGGTTCCTTTCCTCG
CCGCCGTCTCGCTCGGCAATGATGGCCGCCCCCTGCGCACCAAGCTTACGCCCGTGCCGGGCTTCAGTCTCAAGGCCATCGAACAGTGGGCCAGGTCCTG
CCTGGCCCCAGGCTGCACCGTGCTCTGCGACGGACTGGCTTGTTTCGCGGCGGTTACCGCGGCGGGATGCCTGCATCAACGAACCGTGATCGCTGGACGC
AAGCCCAGGGACTTGCCCGAGTTCCAGTGGGTCAACACAGTCCTGGGCAATCTCAAGACCAGCCTGGCCGGGAGCTACCATGCCTTCAACTTCCGCAAGT
ATGCGGCCCGCTACCTGGGCGCATTCGCCTACCGTTTCAACCGCCGATTCGATCTGCGCACGCTGCCTGCGCGACTCCTCGTGGCAGTCGCGTGTTGCCC
GCCACACCCCCTGCGGGTGATTCGGGATGGCTGAGCATCATTGCTAATCAGG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
942 bp313 aa931034+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSMNRIQFQPGLSMPEFLKYYGTQAQCAAALEQARWPAGFRCPRCDGAAYSRVHGRPHALFQCQACRHQTSLIAGTVMQGTKLPLNLWFLAIYLLSQAKT
GLSALALKRHLGVSYPTAWLIQHKLMQAMTLREACYVLEGRVQVDDAYLGGELSGGTAGRGSENKVPFLAAVSLGNDGRPLRTKLTPVPGFSLKAIEQWA
RSCLAPGCTVLCDGLACFAAVTAAGCLHQRTVIAGRKPRDLPEFQWVNTVLGNLKTSLAGSYHAFNFRKYAARYLGAFAYRFNRRFDLRTLPARLLVAVA
CCPPHPLRVIRDG

 

Blast result :
Comments
ISAzbe1 is 84% aa similar to ISTha4.
References
1] ISfinder annotation (2017)
2] Varghese,N. and Submissions,S. (2016) Direct GenBank submission.