ISNimo1
- Family IS1595
- Group IS1595
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FMWO01000027 | ND | Nitrosococcus mobilis | Nitrosococcus mobilis |
DNA section
IS Length : 1052 bp
Ends
IR Length : 23
IRL : CCTGATTAGCAACGAACGTCAGCAAGATTTGTCTGACGAGTTTGTTGCGA
IRR : CCTGATTAGCAACGAACGTCAGCCATTCGAATAGAGTGCAAGGGCTGCGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AATCGGCGATAAAATTGGTT | TGTGCCTTTGAAGCTGATGC | 0 |
DNA sequence
CCTGATTAGCAACGAACGTCAGCAAGATTTGTCTGACGAGTTTGTTGCGACATAAAAGTCATGGCTGTTAAATGATACAAGGAGTTATCGATCATGGCGA
TGAATCGAATTCAATTTCAATCTGGACTGTCGATGCTTGAATTTCTCAAGGGCTTTGGTACGGAGGCGCAGTGCGAGCAAGCGCTGGAAGTTGCTCGTTG
GTCGGATGGGTTTCACTGCCCACGCTGTAACGGTACTGCTTACTATGTTATACGTGATGGTATACGCAAGGTTTTTCAATGCAGAGCCTGCCGACATCAG
ACCTCATTGATTGCCGGGACAGTTTTTCAGGGCGCTAAACTACCGTTGACCATCTGGTTTTTGGCAATTTATCTGGTTAGTCAGGCCAAGACCGGTTTGT
CGTCCCTGGCGCTCAAGCGCCAGCTGGGAGTGAGCTATCCTACGGCATGGTTGATACACCACAAACTGATGCAGGCGATGGCTAATCGTGAGGAGCGCTA
TGTCCTTGATGGCAGAATCCAGGTCGATGATGCTTATCTTGGTGGAGAGCGTGCGGGAGGAAAAGCGGGTAGAGGTTCAGAGAATAAGGTGCCCATTGTT
GCCGCTGTGTCTCTGACTGAAGATGATCACCCTTTGCGCGTGAGGCTTACCCCAGTCTCGGGATTTACGCTAAAGGCAATTTCAGCCTGGGCAAAGGATT
GTCTGGCACCCGGCTGCACGGTGTTCTCGGATGCCTTGGCCTGCTTTGGTGCCGTCACCAAAATTGGCTGTAGCCGCCATTTTACAGTTATCGCCGGATG
CAAACCAAAGGAGACTCCCGAGTTCCGGTGGATCAACACTATCCTCGGCAATCTCAAGACCAGCTTGTCGGGTTGTTACCATGCTTTCAACTTCCGCAAG
TATGCCGCTCGTTATCTTGCCGCCTTCAGTTACCGATTCAACCGGCGTTTTGATCTTTGCTCACTGCACGAACGATTGCTGATCGCCGCTGCTTCGACCA
CTCCGCAGCCCTTGCACTCTATTCGAATGGCTGACGTTCGTTGCTAATCAGG
TGAATCGAATTCAATTTCAATCTGGACTGTCGATGCTTGAATTTCTCAAGGGCTTTGGTACGGAGGCGCAGTGCGAGCAAGCGCTGGAAGTTGCTCGTTG
GTCGGATGGGTTTCACTGCCCACGCTGTAACGGTACTGCTTACTATGTTATACGTGATGGTATACGCAAGGTTTTTCAATGCAGAGCCTGCCGACATCAG
ACCTCATTGATTGCCGGGACAGTTTTTCAGGGCGCTAAACTACCGTTGACCATCTGGTTTTTGGCAATTTATCTGGTTAGTCAGGCCAAGACCGGTTTGT
CGTCCCTGGCGCTCAAGCGCCAGCTGGGAGTGAGCTATCCTACGGCATGGTTGATACACCACAAACTGATGCAGGCGATGGCTAATCGTGAGGAGCGCTA
TGTCCTTGATGGCAGAATCCAGGTCGATGATGCTTATCTTGGTGGAGAGCGTGCGGGAGGAAAAGCGGGTAGAGGTTCAGAGAATAAGGTGCCCATTGTT
GCCGCTGTGTCTCTGACTGAAGATGATCACCCTTTGCGCGTGAGGCTTACCCCAGTCTCGGGATTTACGCTAAAGGCAATTTCAGCCTGGGCAAAGGATT
GTCTGGCACCCGGCTGCACGGTGTTCTCGGATGCCTTGGCCTGCTTTGGTGCCGTCACCAAAATTGGCTGTAGCCGCCATTTTACAGTTATCGCCGGATG
CAAACCAAAGGAGACTCCCGAGTTCCGGTGGATCAACACTATCCTCGGCAATCTCAAGACCAGCTTGTCGGGTTGTTACCATGCTTTCAACTTCCGCAAG
TATGCCGCTCGTTATCTTGCCGCCTTCAGTTACCGATTCAACCGGCGTTTTGATCTTTGCTCACTGCACGAACGATTGCTGATCGCCGCTGCTTCGACCA
CTCCGCAGCCCTTGCACTCTATTCGAATGGCTGACGTTCGTTGCTAATCAGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
954 bp | 317 aa | 94 | 1047 | + | No |
Chemistry : DDE
ORF sequence :
MAMNRIQFQSGLSMLEFLKGFGTEAQCEQALEVARWSDGFHCPRCNGTAYYVIRDGIRKVFQCRACRHQTSLIAGTVFQGAKLPLTIWFLAIYLVSQAKT
GLSSLALKRQLGVSYPTAWLIHHKLMQAMANREERYVLDGRIQVDDAYLGGERAGGKAGRGSENKVPIVAAVSLTEDDHPLRVRLTPVSGFTLKAISAWA
KDCLAPGCTVFSDALACFGAVTKIGCSRHFTVIAGCKPKETPEFRWINTILGNLKTSLSGCYHAFNFRKYAARYLAAFSYRFNRRFDLCSLHERLLIAAA
STTPQPLHSIRMADVRC
GLSSLALKRQLGVSYPTAWLIHHKLMQAMANREERYVLDGRIQVDDAYLGGERAGGKAGRGSENKVPIVAAVSLTEDDHPLRVRLTPVSGFTLKAISAWA
KDCLAPGCTVFSDALACFGAVTKIGCSRHFTVIAGCKPKETPEFRWINTILGNLKTSLSGCYHAFNFRKYAARYLAAFSYRFNRRFDLCSLHERLLIAAA
STTPQPLHSIRMADVRC
Blast result :
Comments
ISNimo1 is 84% aa similar to ISBeb3.
References
1] ISfinder annotation (2017)
2] Ushiki,N. (2016) Direct GenBank submission.
2] Ushiki,N. (2016) Direct GenBank submission.