ISEcl8

  • Family IS1595
  • Group IS1595
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
FKED01000016 ND Enterobacter cloacae
Enterobacter cloacae e438
DNA section
IS Length : 1027 bp

Ends


IR Length : 22/25

IRL : CCTGATTACCCATGTTGTGCAGCCATGCCTATACTGTATGCGTATACAGC
IRR : CCTGATTACCCATGATCTTCAGCCAGCTTCAGCAAGCGGTATGGCATAGG

Insertion site


Left flankDirect repeatRight flankDR Length
ACGTCGGCTGAATAATCAAATAGAAGAATGCTTCTTTGCC0

DNA sequence

CCTGATTACCCATGTTGTGCAGCCATGCCTATACTGTATGCGTATACAGCCATCAAGCAGAGGGTGCAGCCATGGCCAAGAACAAGGTTCAGTGTCAGAA
GGGATTGAGCATAAACGCTTTTATGGCGAAGTACGGCACGGAGGAGCAGTGTGAGAAGGCGCTCTTCCAGTGGCGTTATCCCCAAGGCTTCGTCTGTAAA
AACTGCGCCAATACGACCTTTTGCCGCCTCCACCATCGTCCCCGCATCCTTCAGTGCAACCGTTGCCGCAGCCAGAGCTCGCTCATCAGTGGCAGCATTT
TCGCCTGCACCAAGCTGCCGCTGACCACCTGGTTCCTGGCGCTTCATCTGCTGACGGTCTCCAAGACCGGTCTGTCGGCCATGGAGCTGCATCGCCAGCT
TGGCGTCAACTACAACACGGCCTGGATGGTGAAGCACAAACTGTTGCAGGCGATGAAAGAAGCGGATGATCGGCATCCTCTGCACGGCATTATTCAGCTC
GACGACGCCTACTGGGGCGGCGAACGACGCGGTGGCAAACGAGGACGAGGGGCGGCAGGCAAGACACCTTTTGTAGCGGCAGTTGCTCTGAACGAAGTTG
GACACCCGATAGCCATGCGCATGACGGTCGTTTCTGGTTTCAAAACCAAAGAGATAGGTGCTTGGGCTAAGCGCCACCTGGGGCCGGGAAGTCTGGTCAT
CTCTGACGGCCTCAAATGCTTTCGAGCGGTTGAGCGCGCCACTTGCAACCATCTGGGCTTCACCATGGGCGGGCGTTTGGAGTTGCTGGATCACGCCGCC
TTTCGCTGGGTGAACACGATGCTCGGCAACATCAAAAACTCGCTTCACGGGAGCTGCCATAAGCTTGGCCAGAGGCACATTCCCCGCCATCTCGCTGAAT
ACTGCTTCCGCTTCAACAATCGCTTTGACCTTAGCGGCATGCTCGCCAAGCTTGGGGCTGCTGCGGCGATCACGCCGCCTATGCCATACCGCTTGCTGAA
GCTGGCTGAAGATCATGGGTAATCAGG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
951 bp316 aa721022+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAKNKVQCQKGLSINAFMAKYGTEEQCEKALFQWRYPQGFVCKNCANTTFCRLHHRPRILQCNRCRSQSSLISGSIFACTKLPLTTWFLALHLLTVSKTG
LSAMELHRQLGVNYNTAWMVKHKLLQAMKEADDRHPLHGIIQLDDAYWGGERRGGKRGRGAAGKTPFVAAVALNEVGHPIAMRMTVVSGFKTKEIGAWAK
RHLGPGSLVISDGLKCFRAVERATCNHLGFTMGGRLELLDHAAFRWVNTMLGNIKNSLHGSCHKLGQRHIPRHLAEYCFRFNNRFDLSGMLAKLGAAAAI
TPPMPYRLLKLAEDHG

 

Blast result :
Comments
ISEcl8 is 80% aa similar to ISAeca5.
References
1] ISfinder annotation (2017)
2] SC, Pathogen Informatics, Wellcome Trust Sanger Institute, CB10 1SA, United Kingdom. (2016) Direct GenBank submission.