ISEcl8
- Family IS1595
- Group IS1595
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FKED01000016 | ND | Enterobacter cloacae | Enterobacter cloacae e438 |
DNA section
IS Length : 1027 bp
Ends
IR Length : 22/25
IRL : CCTGATTACCCATGTTGTGCAGCCATGCCTATACTGTATGCGTATACAGC
IRR : CCTGATTACCCATGATCTTCAGCCAGCTTCAGCAAGCGGTATGGCATAGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ACGTCGGCTGAATAATCAAA | TAGAAGAATGCTTCTTTGCC | 0 |
DNA sequence
CCTGATTACCCATGTTGTGCAGCCATGCCTATACTGTATGCGTATACAGCCATCAAGCAGAGGGTGCAGCCATGGCCAAGAACAAGGTTCAGTGTCAGAA
GGGATTGAGCATAAACGCTTTTATGGCGAAGTACGGCACGGAGGAGCAGTGTGAGAAGGCGCTCTTCCAGTGGCGTTATCCCCAAGGCTTCGTCTGTAAA
AACTGCGCCAATACGACCTTTTGCCGCCTCCACCATCGTCCCCGCATCCTTCAGTGCAACCGTTGCCGCAGCCAGAGCTCGCTCATCAGTGGCAGCATTT
TCGCCTGCACCAAGCTGCCGCTGACCACCTGGTTCCTGGCGCTTCATCTGCTGACGGTCTCCAAGACCGGTCTGTCGGCCATGGAGCTGCATCGCCAGCT
TGGCGTCAACTACAACACGGCCTGGATGGTGAAGCACAAACTGTTGCAGGCGATGAAAGAAGCGGATGATCGGCATCCTCTGCACGGCATTATTCAGCTC
GACGACGCCTACTGGGGCGGCGAACGACGCGGTGGCAAACGAGGACGAGGGGCGGCAGGCAAGACACCTTTTGTAGCGGCAGTTGCTCTGAACGAAGTTG
GACACCCGATAGCCATGCGCATGACGGTCGTTTCTGGTTTCAAAACCAAAGAGATAGGTGCTTGGGCTAAGCGCCACCTGGGGCCGGGAAGTCTGGTCAT
CTCTGACGGCCTCAAATGCTTTCGAGCGGTTGAGCGCGCCACTTGCAACCATCTGGGCTTCACCATGGGCGGGCGTTTGGAGTTGCTGGATCACGCCGCC
TTTCGCTGGGTGAACACGATGCTCGGCAACATCAAAAACTCGCTTCACGGGAGCTGCCATAAGCTTGGCCAGAGGCACATTCCCCGCCATCTCGCTGAAT
ACTGCTTCCGCTTCAACAATCGCTTTGACCTTAGCGGCATGCTCGCCAAGCTTGGGGCTGCTGCGGCGATCACGCCGCCTATGCCATACCGCTTGCTGAA
GCTGGCTGAAGATCATGGGTAATCAGG
GGGATTGAGCATAAACGCTTTTATGGCGAAGTACGGCACGGAGGAGCAGTGTGAGAAGGCGCTCTTCCAGTGGCGTTATCCCCAAGGCTTCGTCTGTAAA
AACTGCGCCAATACGACCTTTTGCCGCCTCCACCATCGTCCCCGCATCCTTCAGTGCAACCGTTGCCGCAGCCAGAGCTCGCTCATCAGTGGCAGCATTT
TCGCCTGCACCAAGCTGCCGCTGACCACCTGGTTCCTGGCGCTTCATCTGCTGACGGTCTCCAAGACCGGTCTGTCGGCCATGGAGCTGCATCGCCAGCT
TGGCGTCAACTACAACACGGCCTGGATGGTGAAGCACAAACTGTTGCAGGCGATGAAAGAAGCGGATGATCGGCATCCTCTGCACGGCATTATTCAGCTC
GACGACGCCTACTGGGGCGGCGAACGACGCGGTGGCAAACGAGGACGAGGGGCGGCAGGCAAGACACCTTTTGTAGCGGCAGTTGCTCTGAACGAAGTTG
GACACCCGATAGCCATGCGCATGACGGTCGTTTCTGGTTTCAAAACCAAAGAGATAGGTGCTTGGGCTAAGCGCCACCTGGGGCCGGGAAGTCTGGTCAT
CTCTGACGGCCTCAAATGCTTTCGAGCGGTTGAGCGCGCCACTTGCAACCATCTGGGCTTCACCATGGGCGGGCGTTTGGAGTTGCTGGATCACGCCGCC
TTTCGCTGGGTGAACACGATGCTCGGCAACATCAAAAACTCGCTTCACGGGAGCTGCCATAAGCTTGGCCAGAGGCACATTCCCCGCCATCTCGCTGAAT
ACTGCTTCCGCTTCAACAATCGCTTTGACCTTAGCGGCATGCTCGCCAAGCTTGGGGCTGCTGCGGCGATCACGCCGCCTATGCCATACCGCTTGCTGAA
GCTGGCTGAAGATCATGGGTAATCAGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
951 bp | 316 aa | 72 | 1022 | + | No |
Chemistry : DDE
ORF sequence :
MAKNKVQCQKGLSINAFMAKYGTEEQCEKALFQWRYPQGFVCKNCANTTFCRLHHRPRILQCNRCRSQSSLISGSIFACTKLPLTTWFLALHLLTVSKTG
LSAMELHRQLGVNYNTAWMVKHKLLQAMKEADDRHPLHGIIQLDDAYWGGERRGGKRGRGAAGKTPFVAAVALNEVGHPIAMRMTVVSGFKTKEIGAWAK
RHLGPGSLVISDGLKCFRAVERATCNHLGFTMGGRLELLDHAAFRWVNTMLGNIKNSLHGSCHKLGQRHIPRHLAEYCFRFNNRFDLSGMLAKLGAAAAI
TPPMPYRLLKLAEDHG
LSAMELHRQLGVNYNTAWMVKHKLLQAMKEADDRHPLHGIIQLDDAYWGGERRGGKRGRGAAGKTPFVAAVALNEVGHPIAMRMTVVSGFKTKEIGAWAK
RHLGPGSLVISDGLKCFRAVERATCNHLGFTMGGRLELLDHAAFRWVNTMLGNIKNSLHGSCHKLGQRHIPRHLAEYCFRFNNRFDLSGMLAKLGAAAAI
TPPMPYRLLKLAEDHG
Blast result :
Comments
ISEcl8 is 80% aa similar to ISAeca5.
References
1] ISfinder annotation (2017)
2] SC, Pathogen Informatics, Wellcome Trust Sanger Institute, CB10 1SA, United Kingdom. (2016) Direct GenBank submission.
2] SC, Pathogen Informatics, Wellcome Trust Sanger Institute, CB10 1SA, United Kingdom. (2016) Direct GenBank submission.