ISfinder Mirror Site

ISAcsp8

Family IS1595
Group IS1016

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
AJXD01000017	ND	Acinetobacter sp.	Acinetobacter sp. HA

DNA section

IS Length : 711 bp

Ends

IR Length : 19/21

IRL : GGGGCTGTAGTAGATTAGCTTTGTGATAGTCTAATTTTATGAAGATAACT
IRR : GGGGCTGTAGTAGATAAGATTAAATTCCAGTCCAATTTAACAGAGTTTTA

Insertion site

Left flank	Direct repeat	Right flank	DR Length
AAATCTTTAA	AAACAAAA	AATCACCGAA	8

DNA sequence

GGGGCTGTAGTAGATTAGCTTTGTGATAGTCTAATTTTATGAAGATAACTAGATGTAAATTAAATAAAAAAACTCAAAGAAAGCTATTGGAGTTTTTTAT
TGCTGAAGTAACTGCTAGAACTGCTGCTGATTTACTTGGGATACAACCCAATTCTGCAGCATTGTTCTATAAGAAAATTCGTCAAGTCATTATGTTTCAT
CTTGACCAAGATGCCATTGAAAGATTTGAAGGGCTTATCGAACTTGATGAAAGCTATTTTGGTGGTTCTCGTAAAGGTAAACGTGGTCGGGGAGCTGCAG
GTAAGGTGATCGTGTTTGGCTTACTAAAGCGACACGGGAAAGTGTATACCATCATTGTTCCTGATACCAAATCAATAACACTAATGCCTGTAATCACAAA
GAAAATTACTCCTGATAGTATTGTTTATACTGATCATTGGCACAGTTACAATGCACTCGATGTTGCAGGTTTTAGCCATTATAGAATCAATCATTCAAGC
CATTTTGCTGACGGTCAAAATCATATCAATGGTATCGAGAATTTTTGGAATCAAGCAAAAAGAATCCTTCGAAAATATAATGGTATTGACCGAAATGCCT
TTCCATTGTTTATTAAAGAATGTGAATTTCGATTTAACTATGGCAGCCCAAAACAACAGCTTAAAACTCTGTTAAATTGGACTGGAATTTAATCTTATCT
ACTACAGCCCC

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
654 bp	217 aa	39	692	+	No

ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKITRCKLNKKTQRKLLEFFIAEVTARTAADLLGIQPNSAALFYKKIRQVIMFHLDQDAIERFEGLIELDESYFGGSRKGKRGRGAAGKVIVFGLLKRHG
KVYTIIVPDTKSITLMPVITKKITPDSIVYTDHWHSYNALDVAGFSHYRINHSSHFADGQNHINGIENFWNQAKRILRKYNGIDRNAFPLFIKECEFRFN
YGSPKQQLKTLLNWTGI

Blast result :

Comments

ISAcsp8 is 88% aa similar to ISAba36.

References

1] ISfinder annotation (2017)
2] Malhotra,J., Dua,A., Saxena,A., Sangwan,N., Mukherjee,U., Pandey,N., Rajagopal,R., Khurana,P., Khurana,J.P. and Lal,R. (2012) J. Bacteriol. 194 (18), 5156.