ISEc75
- Family IS1595
- Group IS1016
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| MOKY01000076 | ND | Escherichia coli | Escherichia coli 725 Providencia stuartii MRSN 2154 |
DNA section
IS Length : 717 bp
Ends
IR Length : 17
IRL : GGGGCTGTCCTAGATAACTAAGATCATCTAGGATAGTTCTATGAGAAAAA
IRR : GGGGCTGTCCTAGATAAGGTTTAAATTTTACCTTTAACTATCTGTTTTAG
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| TTGAAAAGAA | AAATTTAA | AATAATTTCA | 8 |
| TAAAACGTCTAA | ATACCGTA | TTCCATTCACCA | 8 |
| ATGAAATATTAT | CTAACATA | TTTTATATGTGA | 8 |
DNA sequence
GGGGCTGTCCTAGATAACTAAGATCATCTAGGATAGTTCTATGAGAAAAAGCAGACTCAGTCAGTACAAACAGGAACGGTTACTTGAGCTGTTTATTGCA
GGCTCTACAGCCCGTATTGCCGCAGAGCTGGTTGGTGTCCACAGGAACACTGCCGCTTACTATTTTCATCGGCTCAGAGTGCTGATAGCAGAGCACGTTG
ATAAGCACTCTTGGTTTGATGGTGAAATTGAATTGGACGAAAGTTATTTTGGTGGTCGTCGTAAAGGCCTTCGTGGTAGAGGTGCTGCTGGCAAAGTGCC
TGTTTTCGGGCTTCTCAAGCGTGGTGGCAAGGTTTATACCAAGGTCATACCCGATGCTAAATCGCGGACATTACTGCCAATAATTGAGTCAAAAATTTAC
CCTGACAGCATCGTCTACACAGATAATTTTGCCAGTTATGACGTACTGGATGTGAGCGATTTTAAGCATTACAGGATCAATCACAGCACCCAGTTTGTCG
ACAAAAAAGACTGGCAAAATCACATCAATGGCATAGAAAATTTTTGGAACCAAGCGAAGCGTCACATGCGTAAATTTAACGGTATTCCGAAGGCTCATTT
TGAGCTGTATTTAAAAGAGTGTGAATGGCGATTTAACACACCTAGTGCAAAACAACAATTAACTATGCTAAAACAGATAGTTAAAGGTAAAATTTAAACC
TTATCTAGGACAGCCCC
GGCTCTACAGCCCGTATTGCCGCAGAGCTGGTTGGTGTCCACAGGAACACTGCCGCTTACTATTTTCATCGGCTCAGAGTGCTGATAGCAGAGCACGTTG
ATAAGCACTCTTGGTTTGATGGTGAAATTGAATTGGACGAAAGTTATTTTGGTGGTCGTCGTAAAGGCCTTCGTGGTAGAGGTGCTGCTGGCAAAGTGCC
TGTTTTCGGGCTTCTCAAGCGTGGTGGCAAGGTTTATACCAAGGTCATACCCGATGCTAAATCGCGGACATTACTGCCAATAATTGAGTCAAAAATTTAC
CCTGACAGCATCGTCTACACAGATAATTTTGCCAGTTATGACGTACTGGATGTGAGCGATTTTAAGCATTACAGGATCAATCACAGCACCCAGTTTGTCG
ACAAAAAAGACTGGCAAAATCACATCAATGGCATAGAAAATTTTTGGAACCAAGCGAAGCGTCACATGCGTAAATTTAACGGTATTCCGAAGGCTCATTT
TGAGCTGTATTTAAAAGAGTGTGAATGGCGATTTAACACACCTAGTGCAAAACAACAATTAACTATGCTAAAACAGATAGTTAAAGGTAAAATTTAAACC
TTATCTAGGACAGCCCC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 657 bp | 218 aa | 41 | 697 | + | No |
Chemistry : DDE
ORF sequence :
MRKSRLSQYKQERLLELFIAGSTARIAAELVGVHRNTAAYYFHRLRVLIAEHVDKHSWFDGEIELDESYFGGRRKGLRGRGAAGKVPVFGLLKRGGKVYT
KVIPDAKSRTLLPIIESKIYPDSIVYTDNFASYDVLDVSDFKHYRINHSTQFVDKKDWQNHINGIENFWNQAKRHMRKFNGIPKAHFELYLKECEWRFNT
PSAKQQLTMLKQIVKGKI
KVIPDAKSRTLLPIIESKIYPDSIVYTDNFASYDVLDVSDFKHYRINHSTQFVDKKDWQNHINGIENFWNQAKRHMRKFNGIPKAHFELYLKECEWRFNT
PSAKQQLTMLKQIVKGKI
Blast result :
Comments
ISEc75 is 83% aa similar to ISNesp1.
References
1] ISfinder annotation (2017)
2] Wang,Y., Zhang,R., Li,J., Wu,Z., Wenjuan,Y., Schwarz,S., Tyrrell,J., Zheng,Y., Wang,S., Shen,Z., Liu,Z., Lei,L., Li,M., Zhang,Q., Wu,C., Zhang,Q., Wu,Y., Walsh,T. and Shen,J. (2016) Direct GenBank submission.
2] Wang,Y., Zhang,R., Li,J., Wu,Z., Wenjuan,Y., Schwarz,S., Tyrrell,J., Zheng,Y., Wang,S., Shen,Z., Liu,Z., Lei,L., Li,M., Zhang,Q., Wu,C., Zhang,Q., Wu,Y., Walsh,T. and Shen,J. (2016) Direct GenBank submission.