ISfinder Mirror Site

ISTaba1

Family IS1595
Group IS1016

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
MHQZ01000002	ND	Tagabacteria bacterium	Tagabacteria bacterium RIFCSPLOWO2 Candidatus Tagabacteria bacterium RIFCSPLOWO2

DNA section

IS Length : 713 bp

Ends

IR Length : 19/24

IRL : GGGTCTTGCCTAGGAAATTTTGATATAATTCCTAGAAAAGACTATGAAAT
IRR : GGGTCTTGCCTAGAATAAATTAATTTCTAAACGCGATCTTTAATAAAATA

Insertion site

Left flank	Direct repeat	Right flank	DR Length
TATATTTAATTAT		TTATTTTTTTATTT	0

DNA sequence

GGGTCTTGCCTAGGAAATTTTGATATAATTCCTAGAAAAGACTATGAAATATAGTAAATTAAGCAATTTTAAAATTAAAAAAATTTTACAGTGTTTTTGC
AACGAATTGACCTCTGTTCAGACAGCCAAACAACTAAAACTGAATCGCAACACCACCAACAGATACTATACCATATTCAGACAAAAAATAGCGGAACACC
AAGAGGAACAGAAAAGGAAATTCAGGGGGAGCATTGAAATAGACGAATCGTATTTTGGTTCAAGACACAAGGGAGACAAGAGAGGAAGAAGCACGGCAAC
CAAGATACCGGTGGTCGGAATACTAAAGAGAAACGGAATGGTCTATACGGAGATAATCCCAGACGCCTCCAGATACTCAATAATGCCAATAATTACAAGA
TTAATTCAGAAATCAAAGTCCAATATTTATACAGACAAATGGAAAAGTTATGACGGTTTAGTATTCCAAGGATACAAACATTACAGAATAAATCATTCCA
AGGAATTCGTTAAGAAAAATCATCACATCAACGGCATTGAATCATTCTGGTCTTACGTCAAACGAAAGATGAGAAAACACAATGGCATCTCCAAAGATAA
ATTCTATTTTTATCTGAAAGAATCGGAGTTCAGATTTAACAACCGAAACAAAAACCTGTATAATATTTTATTAAAGATCGCGTTTAGAAATTAATTTATT
CTAGGCAAGACCC

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
651 bp	216 aa	44	694	+	No

ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKYSKLSNFKIKKILQCFCNELTSVQTAKQLKLNRNTTNRYYTIFRQKIAEHQEEQKRKFRGSIEIDESYFGSRHKGDKRGRSTATKIPVVGILKRNGMV
YTEIIPDASRYSIMPIITRLIQKSKSNIYTDKWKSYDGLVFQGYKHYRINHSKEFVKKNHHINGIESFWSYVKRKMRKHNGISKDKFYFYLKESEFRFNN
RNKNLYNILLKIAFRN

Blast result :

Comments

ISTaba1 is 69% aa similar to ISAcra1.

References

1] ISfinder annotation (2017)
2] Anantharaman,K., Brown,C.T., Hug,L.A., Sharon,I., Castelle,C.J., Probst,A.J., Thomas,B.C., Singh,A., Wilkins,M.J., Karaoz,U., Brodie,E.L., Williams,K.H., Hubbard,S.S. and Banfield,J.F. (2016) Nat Commun 7, 13219.