ISAcve1

  • Family IS1595
  • Group IS1016
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
JRHX01000052 ND Acinetobacter venetianus
Acinetobacter venetianus LUH13518
DNA section
IS Length : 738 bp

Ends


IR Length : 17

IRL : GGGTCTTAGGAAGTTAAGCACAAATTAAAGTGTGGTAACTTACTAAGATG
IRR : GGGTCTTAGGAAGTTAAAGCGGGTTATTTCTTAGAAGTTTAAGCAACTCA

Insertion site


Left flankDirect repeatRight flankDR Length
TATTTTTTATATTTATTTTAAAAAATAGCCCACTC7

DNA sequence

GGGTCTTAGGAAGTTAAGCACAAATTAAAGTGTGGTAACTTACTAAGATGGAAACAAAAAATAGGTACTATCGCCGTTCAAGAATCACAGAAGCTAAATT
TAGACAGCTTGTTCGATGTTTTGCACTCGATTTTACGGCATCTAGCACAGCAGAGTTGATCGGGGTTTCTGTCCGATCAACGAACACCATCTTTCTTAAA
ATACGCCATCGAATCGCAGAACACTGTGAACTTGAATCACCTTTGCAAGGTGCTGTTGAAGTCGATGAATCTTACTTCGGCGCTCACAGGGTTCGTGGTA
AACGTGGTCGCGGTGCTTATGGTAAAACCATCGTTTTTGGTTTGTTAAAACGACAAGGTAAAGTGTATACCGAGATTGTTCCAGATTGCACCAAAGCCAC
GCTACAAGGCATTATCCGTGGTCATGTTGACCTTGGTACTGTGATTCACTCTGATGGCTGGCGTGGTTATGAAGGCTTAGTGGATATTGGCTACGACAAG
CACTTTAGAGTTAATCATGGAGCTAATGAGTTTGCCAATGGTGACCGCCACATCAATGGAATTGAGTCTTTCTGGAGCTATGCAAAAAGACGATTAGCGA
AGTTTAATGGTGTAGCAAAACATACGTTCTATCTGCACTTGAAAGAAACAGAGTATCGTTTCAATCATCGGCATGATAACTTGTATCTTGAGTTGCTTAA
ACTTCTAAGAAATAACCCGCTTTAACTTCCTAAGACCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
678 bp225 aa48725+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

METKNRYYRRSRITEAKFRQLVRCFALDFTASSTAELIGVSVRSTNTIFLKIRHRIAEHCELESPLQGAVEVDESYFGAHRVRGKRGRGAYGKTIVFGLL
KRQGKVYTEIVPDCTKATLQGIIRGHVDLGTVIHSDGWRGYEGLVDIGYDKHFRVNHGANEFANGDRHINGIESFWSYAKRRLAKFNGVAKHTFYLHLKE
TEYRFNHRHDNLYLELLKLLRNNPL

 

Blast result :
Comments
ISAcve1 is 79% aa similar to ISDli1.
References
1] ISfinder annotation (2017)
2] Fondi,M., Maida,I., Perrin,E., Orlandini,V., La Torre,L., Bosi,E., Negroni,A., Zanaroli,G., Fava,F., Decorosi,F., Giovannetti,L., Viti,C., Vaneechoutte,M., Dijkshoorn,L. and Fani,R. (2016) Sci Rep 6, 21985.