ISPaen5
- Family IS1595
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FNSW01000001 | ND | Paenibacillus sp. | Paenibacillus sp. GP183 |
DNA section
IS Length : 996 bp
Ends
IR Length : 17/22
IRL : GACTATGCACTCTGCTCAGGAACAACTTTCAATACGAACATACGTGTGAT
IRR : GGCTATGCACATACCTCAGGAAACAGCGAAAGGGGCAGAAACAAGGCAAG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TCGATATACAATAGAG | AGAACTGATGTTCT | TATTCTTTTGGAGAAGGAGT | 14 |
DNA sequence
GACTATGCACTCTGCTCAGGAACAACTTTCAATACGAACATACGTGTGATAAAATGGAAATATCAAACATACGTTCGGAGTGATTGGAAGATGGCAAAAG
CAGTTGAAATGTCATTAATCAAATTTCAAAAAGAATTTCGAACCGAGGAAGACTGTGCGTCCTACCTTTCGGCTCAAAAATGGAAAGATGGTTTCCAATG
CCCACGCTGCAAACATGAGAAATACTACTTCATTCAAAAACGAAGACTGTACGAGTGCCAGCAGTGTGCTCATCAGACCTCCGTGACCGCGGGAACCATC
ATGCATAAATCTAAGTTGCCTCTACTGACCTGGTTTTGGGCGATTTACTTAGTTGTCCATGATAAGCGAGGTCGGTCAGCACTAGCACTTTCTGACGTTC
TCGAAATCAACTACAGAACGGCGCTACGCTTGCTGCGCAAGATTCGAGAGGCGATGAGGGCCCAAGATGCCAACTATCAATTAAGTGGTTTAGTGGAAAT
GGACGACGCTTATTTCGGCGGACGCAAATCAGGAACAGATGGCAGAGGCACTGGAAAAACAAAAGTCGCCATCGCTCTATCCACAGATGAAGAAGGCCGA
CCTAGGCATCTTCGAATGAAGGTCATTGAAAAGGTCAGCATTCAGGAGATCCATCGAGTAGCTGAAGAATGCATAGCTAAAGGCTCCACGATCCATTCCG
ATGGTCATCCTTCCTACAAACAATTGAATACAATGGGCTTCCACCACATCAGCAAAAACTACTACCAAGAAGACAATGAAGAATTTCTCAAATGGCTTCA
CACTGTGATCAGTAACGCAAAAGCTTTCGTCGAAGGAACCTACCATGGGCTTGGTTCCACATACTTGCAGACGTATCTCGATGAATTTTGCTATCGATTT
AATCGTCGTTTCTTTGTAAAAGAATTATTCGGACGACTTCTGAATGCTTGCCTTGTTTCTGCCCCTTTCGCTGTTTCCTGAGGTATGTGCATAGCC
CAGTTGAAATGTCATTAATCAAATTTCAAAAAGAATTTCGAACCGAGGAAGACTGTGCGTCCTACCTTTCGGCTCAAAAATGGAAAGATGGTTTCCAATG
CCCACGCTGCAAACATGAGAAATACTACTTCATTCAAAAACGAAGACTGTACGAGTGCCAGCAGTGTGCTCATCAGACCTCCGTGACCGCGGGAACCATC
ATGCATAAATCTAAGTTGCCTCTACTGACCTGGTTTTGGGCGATTTACTTAGTTGTCCATGATAAGCGAGGTCGGTCAGCACTAGCACTTTCTGACGTTC
TCGAAATCAACTACAGAACGGCGCTACGCTTGCTGCGCAAGATTCGAGAGGCGATGAGGGCCCAAGATGCCAACTATCAATTAAGTGGTTTAGTGGAAAT
GGACGACGCTTATTTCGGCGGACGCAAATCAGGAACAGATGGCAGAGGCACTGGAAAAACAAAAGTCGCCATCGCTCTATCCACAGATGAAGAAGGCCGA
CCTAGGCATCTTCGAATGAAGGTCATTGAAAAGGTCAGCATTCAGGAGATCCATCGAGTAGCTGAAGAATGCATAGCTAAAGGCTCCACGATCCATTCCG
ATGGTCATCCTTCCTACAAACAATTGAATACAATGGGCTTCCACCACATCAGCAAAAACTACTACCAAGAAGACAATGAAGAATTTCTCAAATGGCTTCA
CACTGTGATCAGTAACGCAAAAGCTTTCGTCGAAGGAACCTACCATGGGCTTGGTTCCACATACTTGCAGACGTATCTCGATGAATTTTGCTATCGATTT
AATCGTCGTTTCTTTGTAAAAGAATTATTCGGACGACTTCTGAATGCTTGCCTTGTTTCTGCCCCTTTCGCTGTTTCCTGAGGTATGTGCATAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
891 bp | 296 aa | 91 | 981 | + | No |
Chemistry : DDE
ORF sequence :
MAKAVEMSLIKFQKEFRTEEDCASYLSAQKWKDGFQCPRCKHEKYYFIQKRRLYECQQCAHQTSVTAGTIMHKSKLPLLTWFWAIYLVVHDKRGRSALAL
SDVLEINYRTALRLLRKIREAMRAQDANYQLSGLVEMDDAYFGGRKSGTDGRGTGKTKVAIALSTDEEGRPRHLRMKVIEKVSIQEIHRVAEECIAKGST
IHSDGHPSYKQLNTMGFHHISKNYYQEDNEEFLKWLHTVISNAKAFVEGTYHGLGSTYLQTYLDEFCYRFNRRFFVKELFGRLLNACLVSAPFAVS
SDVLEINYRTALRLLRKIREAMRAQDANYQLSGLVEMDDAYFGGRKSGTDGRGTGKTKVAIALSTDEEGRPRHLRMKVIEKVSIQEIHRVAEECIAKGST
IHSDGHPSYKQLNTMGFHHISKNYYQEDNEEFLKWLHTVISNAKAFVEGTYHGLGSTYLQTYLDEFCYRFNRRFFVKELFGRLLNACLVSAPFAVS
Blast result :
Comments
ISPaen5 is 63% aa similar to ISCku1.
References
1] ISfinder annotation (2017)
2] Varghese,N. and Submissions,S. (2016) Direct GenBank submission.
2] Varghese,N. and Submissions,S. (2016) Direct GenBank submission.