ISUnb4
- Family IS1595
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
LPNI01000100 | ND | unclassified Bacteria | unclassified Bacteria Bacterium P201 isolate P201 |
DNA section
IS Length : 1031 bp
Ends
IR Length : 21/26
IRL : AATGACTAAGCAATATTTCACCTAAACGAGGTCATGCGCAGCAGTTTGGC
IRR : AATGATTACGCAATGTTATACCTAAAGTCATTCTTGTAAGCCAGGGCCGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TCAGTAGGTTAAAGTTACAAAAA | AAAAGAAATGCCAGGCGGCCCATT | 0 |
DNA sequence
AATGACTAAGCAATATTTCACCTAAACGAGGTCATGCGCAGCAGTTTGGCACATACGGTCGATAACTTTGTCCCTATAAACCAAAGGGATATGAGACTTA
TCGACTTCATGCGGGAGTTTCCCGACGAGCAGAGTTGCGAGCGTAAGCTGAAAGAGTACCGTGAGGCACAGGGTGTCGTCTGCCCTCACTGCGGTTGTCA
GGAGTATTATTGGAAGGGCGACAAGAAGTGCTTCGAGTGCAAGCACTGCCGCTATCGCCAGAGTCTGAAGGCGAACACCGTGATGCACGGGAGCCAGTTG
CCGCTGCGGTACTGGTTCATCACCATGCACCTGCTGACTTCGACGAAGAAGAGCTTCTCCGCCGCCGAACTCCAACGCCAGCTCGGGCACAAGAACTATA
TGCCAATTTGGGCGATGCTTCATAAACTCCGGAATGCCATGGGTAAACGGGATGCCGAGTACAAGGTGTTCGGGATGGTGGAGCTGGACGAGGGCTTCTT
CTCTACCGAAATCCCTGATTCCGAGAAGGATAAGCCTCTCAAACGGGGGCATGGCAGCCAGAAGAAGACCAAGGTCCTGGTCCTGGCGGAGACAGCCGAG
GGAACTCCCACCAAGAAATCGGACAAGCCCACCAAGGTCAAGCACATCAAGATGATCGTCATCGACAACCTCAAGTCCGAGACCATCGACGGCAAGGTCA
AGATGTATGTGAATCCCGATTCAACCATTACTTCGGACGATTCCAAATCATATACAAACTTCAAGTCACTTGTGAAAGAGCACATCCATCAGGTCATCGA
ACCGGACCAGGTCGGGAAGATCCTTCCCTGGGTCCACATCGCCATCAGCAACGCCAAGCGGCTTCTGCTGGATGTCTACCATGACATCACTCCGGACTAT
CTCCAGAACTACTTGAACGAGTTCTGCTACAAGTTCAACCGACGGTACTTCGGCGACAGGCTGTTCGACAGGCTCATGGTTGCGGCCCTGGCTTACAAGA
ATGACTTTAGGTATAACATTGCGTAATCATT
TCGACTTCATGCGGGAGTTTCCCGACGAGCAGAGTTGCGAGCGTAAGCTGAAAGAGTACCGTGAGGCACAGGGTGTCGTCTGCCCTCACTGCGGTTGTCA
GGAGTATTATTGGAAGGGCGACAAGAAGTGCTTCGAGTGCAAGCACTGCCGCTATCGCCAGAGTCTGAAGGCGAACACCGTGATGCACGGGAGCCAGTTG
CCGCTGCGGTACTGGTTCATCACCATGCACCTGCTGACTTCGACGAAGAAGAGCTTCTCCGCCGCCGAACTCCAACGCCAGCTCGGGCACAAGAACTATA
TGCCAATTTGGGCGATGCTTCATAAACTCCGGAATGCCATGGGTAAACGGGATGCCGAGTACAAGGTGTTCGGGATGGTGGAGCTGGACGAGGGCTTCTT
CTCTACCGAAATCCCTGATTCCGAGAAGGATAAGCCTCTCAAACGGGGGCATGGCAGCCAGAAGAAGACCAAGGTCCTGGTCCTGGCGGAGACAGCCGAG
GGAACTCCCACCAAGAAATCGGACAAGCCCACCAAGGTCAAGCACATCAAGATGATCGTCATCGACAACCTCAAGTCCGAGACCATCGACGGCAAGGTCA
AGATGTATGTGAATCCCGATTCAACCATTACTTCGGACGATTCCAAATCATATACAAACTTCAAGTCACTTGTGAAAGAGCACATCCATCAGGTCATCGA
ACCGGACCAGGTCGGGAAGATCCTTCCCTGGGTCCACATCGCCATCAGCAACGCCAAGCGGCTTCTGCTGGATGTCTACCATGACATCACTCCGGACTAT
CTCCAGAACTACTTGAACGAGTTCTGCTACAAGTTCAACCGACGGTACTTCGGCGACAGGCTGTTCGACAGGCTCATGGTTGCGGCCCTGGCTTACAAGA
ATGACTTTAGGTATAACATTGCGTAATCATT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
993 bp | 330 aa | 34 | 1026 | + | No |
Chemistry : DDE
ORF sequence :
MRSSLAHTVDNFVPINQRDMRLIDFMREFPDEQSCERKLKEYREAQGVVCPHCGCQEYYWKGDKKCFECKHCRYRQSLKANTVMHGSQLPLRYWFITMHL
LTSTKKSFSAAELQRQLGHKNYMPIWAMLHKLRNAMGKRDAEYKVFGMVELDEGFFSTEIPDSEKDKPLKRGHGSQKKTKVLVLAETAEGTPTKKSDKPT
KVKHIKMIVIDNLKSETIDGKVKMYVNPDSTITSDDSKSYTNFKSLVKEHIHQVIEPDQVGKILPWVHIAISNAKRLLLDVYHDITPDYLQNYLNEFCYK
FNRRYFGDRLFDRLMVAALAYKNDFRYNIA
LTSTKKSFSAAELQRQLGHKNYMPIWAMLHKLRNAMGKRDAEYKVFGMVELDEGFFSTEIPDSEKDKPLKRGHGSQKKTKVLVLAETAEGTPTKKSDKPT
KVKHIKMIVIDNLKSETIDGKVKMYVNPDSTITSDDSKSYTNFKSLVKEHIHQVIEPDQVGKILPWVHIAISNAKRLLLDVYHDITPDYLQNYLNEFCYK
FNRRYFGDRLFDRLMVAALAYKNDFRYNIA
Blast result :
Comments
ISUnb4 is 80% aa similar to ISCrsp1.
References
1] ISfinder annotation (2017)
2] Wolfe,R., Solden,L. and Wrighton,K. (2015) Direct GenBank submission.
2] Wolfe,R., Solden,L. and Wrighton,K. (2015) Direct GenBank submission.