ISfinder Mirror Site

ISEvi2

Family IS1595
Group

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
CP003346	ND	Echinicola vietnamensis	Echinicola vietnamensis DSM 17526

DNA section

IS Length : 1036 bp

Ends

IR Length : 21/27

IRL : TATGTATATCCGCAATTGCACCAGTAGCCAAATAAAATAACATTGACAGT
IRR : TATGATTATCCGCAATCATGCCAGTAGGGATAAATAGCAGCAATGATGAG

Insertion site

Left flank	Direct repeat	Right flank	DR Length
GTTTTTGAAA	TTAATAAA	TTAGACCCTT	8

DNA sequence

TATGTATATCCGCAATTGCACCAGTAGCCAAATAAAATAACATTGACAGTTGGTGTCCATTGCTTCAATAGAGTTATTACTATCTATAAATTAGGTCAAA
ACAAACGGTTCTGACCATGAATATCATCAACTTCATCAATCGGTTTCCTGACGAATCTTCCTGTGTCGAGTTTATCAGGCAGAAAAGGGGCCAAGCTGGT
ATTGTCTGTAAAAGGTGCGACTGTACCAAGCATTATTGGTTGGCCAACAAAAAGTCCTTTCAATGCTCTTCCTGCAGCTTCCGAACAAGTATCAAAAGTG
GTACGGTTATGGAAAACAGTAACCTTCCGATCAGGACATGGTTGTTGGCCATGACCTTCATTACAGCTACCAAGAAGGGATTCAGTGCATCGGAACTGCA
AAGGCAGCTGGGCATGAAGCGATATGAACCTGTTTTCAGAATGTACCATAAGCTCCGCAAGGTCATGGGGAAACGCGATGATATCTACAGGCTTGAAGAC
ATGGTCGAGTATGACGAGGCTTTTGTGGGCCAAGCCACCAAAAGCCCGAACAAGCTCAAACGAGGCAGGGGCAGCCAAAAACGGTCGATTGTGGCGGTAA
TGGCCGAATCAACGGTTTTGGAAGACCTTGAAACGGGCAAGTCCGACAAGAGCTGTAGATATTTTAAGATGAAGAAGATAAAGAACCTGGAGGCGAAAAC
TGCCCAGAATTTGGTCAGGGAATTTATTGATCCAAACTCCGTGCTTCAAACAGATATGAGCACCACCTTCTCAGACCTGAGTGATTGTATAGATGTGCAT
GTCAAGGAGATATCGGGAACCGAAAAGGGGCACTTCAACCTCAAATGGGTACACATTGCTATAAGTAACTTAAAGAAACACCTGCAGACATACCATATGA
TAAGTGAAAGAATGATGCAAAACTATCTTGACGAGTTCTGTTATAAGCTCAACAGAAGATATTTCGGTCAAAAACTATTTGACAGGCTCATCATTGCTGC
TATTTATCCCTACTGGCATGATTGCGGATAATCATA

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
915 bp	304 aa	117	1031	+	No

ORF function : Transposase
Chemistry : DDE

ORF sequence :

MNIINFINRFPDESSCVEFIRQKRGQAGIVCKRCDCTKHYWLANKKSFQCSSCSFRTSIKSGTVMENSNLPIRTWLLAMTFITATKKGFSASELQRQLGM
KRYEPVFRMYHKLRKVMGKRDDIYRLEDMVEYDEAFVGQATKSPNKLKRGRGSQKRSIVAVMAESTVLEDLETGKSDKSCRYFKMKKIKNLEAKTAQNLV
REFIDPNSVLQTDMSTTFSDLSDCIDVHVKEISGTEKGHFNLKWVHIAISNLKKHLQTYHMISERMMQNYLDEFCYKLNRRYFGQKLFDRLIIAAIYPYW
HDCG

Blast result :

Comments

ISEvi2 is 82% aa similar to ISBeba1.

References

1] ISfinder annotation (2017)
2] Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Peters,L., Ovchinnikova,G., Teshima,H., Kyrpides,N., Mavromatis,K., Ivanova,N., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Brambilla,E., Klenk,H.-P. and Eisen,J.A. (2012) Direct GenBank submission.