ISAsp24

  • Family IS1595
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
LJOV01000716 ND Anabaena sp.
Anabaena sp. MDT14b 1565
DNA section
IS Length : 988 bp

Ends


IR Length : 18/23

IRL : AACGTATATCCGCAAATATACCACTCCGCAGATAGGATGCGAACAAAGGG
IRR : AATGTATATCCGCTATATTACCAGTAAGTTTTAGCAACGGCAAGAGTTAG

Insertion site


Left flankDirect repeatRight flankDR Length
TATCTCTTTGGGCTTTTAGTCAATAATAATAGTACGAAAACAG0

DNA sequence

AACGTATATCCGCAAATATACCACTCCGCAGATAGGATGCGAACAAAGGGCAGAACTTTGCAACATGAAATTAATAAACTTTATCAAACAATTTCCTGAT
GAGCAAAGTTGCAAGGAACATTTTAGGCTTAAACGCGAGCAAGAAGGTATCAGTTGTAAAGAGTGTAGATGTACAAAACATTATTGGCTAAAAGCTAAGT
ATCAATGGCAGTGCAGCCGCTGTGATTTTAGAACTATACTGCGTAGCGGAACAATTATGGAGCATGCCAAATTACCTTTTCAAAAATGGTACATGGCGAT
GGCTTTTATGAGTTTAACTAAAAAAGGAATATCTGCAACGGAACTCCAAAAGCAAATGGATCACTCACGTTATGCAAGCATATGGAACTTGATGCATAAA
ATAAGAGAATCAATGGGTAAACGAGATTCTTTATATACACTTACAGGAATGATAGAAATGGACGAGGGCTATTTTGAAAAAGCCACTCCTGAAGGAACAA
AGTTAAAGCGAGGAAAAGGAAGCCAAAAGCAACAAAACGTAGCGGTTTTAGCAGAATCAACACCACTTGAAAATTTGGATACAGGTATTACATCGAAACA
TTGCAGGTACTTTAAGATGCAGGTTTTAAATAATCATAAGTCTGATGCAATCAATAGCTTGTTCATTAACAACATTGAAGATAGCAGTATTGTATTTACC
GATAAAAGCACGAGTTACGTAGATATTGCTGATTATGTTGAGGTTCATGTAAGTGAAGTATCAACTGAGATTACAACCAACACTACACTTAAATGGGTGC
ATATTGCAATTGCAAACGCCAAAAGAATGCTACTCGGAATTTATCACAAAATTAAAGGTCTATACCTGCAAAATTATCTCAACGAGTTTTGCTATAAACT
CAATAGAAGATACTTTGGAGATAAACTCTTTGATAGACTAACTCTTGCCGTTGCTAAAACTTACTGGTAATATAGCGGATATACATT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
906 bp301 aa65970+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKLINFIKQFPDEQSCKEHFRLKREQEGISCKECRCTKHYWLKAKYQWQCSRCDFRTILRSGTIMEHAKLPFQKWYMAMAFMSLTKKGISATELQKQMDH
SRYASIWNLMHKIRESMGKRDSLYTLTGMIEMDEGYFEKATPEGTKLKRGKGSQKQQNVAVLAESTPLENLDTGITSKHCRYFKMQVLNNHKSDAINSLF
INNIEDSSIVFTDKSTSYVDIADYVEVHVSEVSTEITTNTTLKWVHIAIANAKRMLLGIYHKIKGLYLQNYLNEFCYKLNRRYFGDKLFDRLTLAVAKTY
W

 

Blast result :
Comments
ISAsp24 is 74% aa similar to ISBbi1.
References
1] ISfinder annotation (2017)
2] Driscoll,C. (2015) Direct GenBank submission.